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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[REDMINE1D-373] [RM-8547] Change log 0.46.0</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/REDMINE1D-373</link>
                <project id="11002" key="REDMINE1D">1D Redmine </project>
                    <description>&lt;p&gt;&lt;em&gt;&lt;font color=&quot;#505f79&quot;&gt; Created on 2023-12-14 13:38:33 by Pierre-yves Chabaud. % Done: 100&lt;/font&gt;&lt;/em&gt;&lt;/p&gt;


&lt;p&gt;Added&lt;/p&gt;

&lt;p&gt;Changed&lt;/p&gt;

&lt;p&gt;Deprecated&lt;/p&gt;

&lt;p&gt;Removed&lt;/p&gt;

&lt;p&gt;Fixed&lt;/p&gt;</description>
                <environment></environment>
        <key id="24337">REDMINE1D-373</key>
            <summary>[RM-8547] Change log 0.46.0</summary>
                <type id="3" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10518&amp;avatarType=issuetype">Task</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="r2j.migrate">Redmine-Jira Migtation</assignee>
                                    <reporter username="r2j.migrate">Redmine-Jira Migtation</reporter>
                        <labels>
                    </labels>
                <created>Thu, 14 Dec 2023 18:16:40 +0000</created>
                <updated>Tue, 6 Feb 2024 18:22:09 +0000</updated>
                            <resolved>Tue, 6 Feb 2024 18:22:09 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>1</watches>
                                                                <comments>
                            <comment id="37033" author="r2j.migrate" created="Tue, 6 Feb 2024 18:21:26 +0000"  >&lt;p&gt;Comment by Pierre-yves Chabaud on 2024-01-11 16:39:08:&lt;br/&gt;
*&lt;b&gt;Added&lt;/b&gt;*&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;The API now handles multiple lsf&lt;/li&gt;
	&lt;li&gt;In full multiobs, Amazed provides now one model per observation&lt;/li&gt;
	&lt;li&gt;&quot;not and&quot; operator have been added to filtering feature&lt;/li&gt;
	&lt;li&gt;A warning is raised when lambda range is clamped (it occurs when user lambda range is not compliant with the lambda grid of the input spectrum)&lt;/li&gt;
	&lt;li&gt;String vectors type are now available in Amazed output&lt;/li&gt;
	&lt;li&gt;The flux uncertainty with direct integration method is now available in Amazed output&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;*&lt;b&gt;Changed&lt;/b&gt;*&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;Change line ID as line number in linecatalog, ensuring uniqueness of line name, wavelength (rounded to 2 decimals) and type (E or A)&lt;/li&gt;
	&lt;li&gt;Change version of LBFGSpp to v0.3.0&lt;/li&gt;
	&lt;li&gt;Changes the way of dealing with redshifts candidates with overlapping integration ranges. In case of overlap greater than 30%, only the best candidates (i.e. highest proba) is selected. In other case, the overlap is equally splitted and candidates are both kept&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;*&lt;b&gt;Deprecated&lt;/b&gt;*&lt;/p&gt;

&lt;p&gt;*&lt;b&gt;Removed&lt;/b&gt;*&lt;/p&gt;

&lt;p&gt;*&lt;b&gt;Fixed&lt;/b&gt;*&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;The linemeas method is no more executed when redshift solver has failed&lt;/li&gt;
	&lt;li&gt;Better protect bad calibration directory content from segfault, and raise informative exceptions&lt;/li&gt;
	&lt;li&gt;Line ratio amplitude of absorption lines and Lya asym parameters have been fixed in the photometric model&lt;/li&gt;
&lt;/ul&gt;
</comment>
                            <comment id="37034" author="r2j.migrate" created="Tue, 6 Feb 2024 18:21:33 +0000"  >&lt;p&gt;Comment by Didier Vibert on 2024-01-12 11:03:33:&lt;br/&gt;
Pierre-yves Chabaud wrote in #note-2:&lt;br/&gt;
&amp;gt; *&lt;b&gt;Added&lt;/b&gt;*&lt;br/&gt;
&amp;gt;&lt;br/&gt;
&lt;span class=&quot;error&quot;&gt;&amp;#91;commentaire: il manque l&amp;#39;ajout du checker de param&#232;tre&amp;#93;&lt;/span&gt;&lt;/p&gt;
&lt;ul&gt;
	&lt;li&gt;The API is now checking the syntax of the json input parameter file, raising an error if the syntax is wrong or if some required parameters are missing, issueing a warning for each unused parameter&lt;br/&gt;
&amp;gt; * The API now handles multiple lsf&lt;br/&gt;
included in each spectrum of a multi-obs&lt;br/&gt;
( but the current multi-obs in interleave mode is only able to handle one lsf: the first of the list is chosen)&lt;br/&gt;
&amp;gt; * In full multiobs, Amazed provides now one model per observation&lt;br/&gt;
&amp;gt; * &quot;not and&quot; operator have been added to filtering feature&lt;br/&gt;
&amp;gt; * A warning is raised when lambda range is clamped (it occurs when user lambda range is not compliant with the lambda grid of the input spectrum)&lt;br/&gt;
&amp;gt; * String vectors type are now available in Amazed output&lt;br/&gt;
&amp;gt; * The flux uncertainty with direct integration method is now available in Amazed output&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; *&lt;b&gt;Changed&lt;/b&gt;*&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; * Change line ID as line number in linecatalog, ensuring uniqueness of line name, wavelength (rounded to 2 decimals) and type (E or A)&lt;br/&gt;
&amp;gt; * Change version of LBFGSpp to v0.3.0&lt;br/&gt;
&amp;gt; * Changes the way of dealing with redshift candidates with overlapping integration ranges. In case of overlap greater than 30%, only the best candidates (i.e. highest proba) is selected. In other case, the overlap is equally splitted and candidates are both kept&lt;br/&gt;
&amp;gt;&lt;br/&gt;
[ il manque l&apos;issue #8525 =&amp;gt; modif des linecatalog et lineratio, peut &#234;tre un recap &#224; demander &#224; @vlebrun]&lt;br/&gt;
&amp;gt; *&lt;b&gt;Deprecated&lt;/b&gt;*&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; *&lt;b&gt;Removed&lt;/b&gt;*&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; *&lt;b&gt;Fixed&lt;/b&gt;*&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt;  * The linemeas method is no more executed when redshift solver has failed&lt;br/&gt;
&amp;gt;  * Better protect bad calibration directory content from segfault, and raise informative exceptions&lt;br/&gt;
&amp;gt;  * Line ratio amplitude of absorption lines and Lya asym parameters have been fixed in the photometric model&lt;/li&gt;
	&lt;li&gt;output of fitted Line ratio main amplitude of absorption lines&lt;/li&gt;
	&lt;li&gt;output of fitted Lya asym parameters&lt;/li&gt;
	&lt;li&gt;output of fitted photometric model&lt;/li&gt;
	&lt;li&gt;computation of cumulative SNR of strong emmission lines fixed and  added a cumulative SNR al all emission lines&lt;/li&gt;
&lt;/ul&gt;
</comment>
                            <comment id="37035" author="r2j.migrate" created="Tue, 6 Feb 2024 18:21:40 +0000"  >&lt;p&gt;Comment by Pierre-yves Chabaud on 2024-01-16 15:13:13:&lt;br/&gt;
Last version to validate:&lt;/p&gt;


&lt;p&gt;*&lt;b&gt;Added&lt;/b&gt;*&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;The API is now checking the syntax of the json input parameter file, raising an error if the syntax is wrong or if some required parameters are missing, issueing a warning for each unused parameter&lt;/li&gt;
	&lt;li&gt;The API is now handling one lsf per observation (but the current multi-observation in interleave mode is only able to handle one lsf: the first of the list is chosen)&lt;/li&gt;
	&lt;li&gt;In full multi-observation mode, Amazed provides now one model per observation&lt;/li&gt;
	&lt;li&gt;&quot;not and&quot; operator have been added to filtering feature&lt;/li&gt;
	&lt;li&gt;A warning is raised when lambda range is clamped (it occurs when user lambda range is not compliant with the lambda grid of the input spectrum)&lt;/li&gt;
	&lt;li&gt;String vectors type are now available in Amazed output&lt;/li&gt;
	&lt;li&gt;The flux uncertainty with direct integration method is now available in Amazed output&lt;/li&gt;
	&lt;li&gt;The cumulative SNR for all emission lines is now available in Amazed output&lt;/li&gt;
&lt;/ul&gt;



&lt;p&gt;*&lt;b&gt;Changed&lt;/b&gt;*&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;Change line ID as line number in linecatalog, ensuring uniqueness of line name, wavelength (rounded to 2 decimals) and type (E or A)&lt;/li&gt;
	&lt;li&gt;Change version of LBFGSpp to v0.3.0&lt;/li&gt;
	&lt;li&gt;Changes the way of dealing with redshifts candidates with overlapping integration ranges. In case of overlap greater than 30%, only the best candidates (i.e. highest proba) is selected. In other case, the overlap is equally splitted and candidates are both kept&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;*&lt;b&gt;Deprecated&lt;/b&gt;*&lt;/p&gt;

&lt;p&gt;*&lt;b&gt;Removed&lt;/b&gt;*&lt;/p&gt;

&lt;p&gt;*&lt;b&gt;Fixed&lt;/b&gt;*&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;The linemeas method is no more executed when redshift solver has failed&lt;/li&gt;
	&lt;li&gt;Better protect bad calibration directory content from segfault, and raise informative exceptions&lt;/li&gt;
	&lt;li&gt;The output of fitted Line ratio main amplitude of absorption lines is fixed&lt;/li&gt;
	&lt;li&gt;The output of fitted Lya asym parameters is fixed&lt;/li&gt;
	&lt;li&gt;The output of fitted photometric model is fixed&lt;/li&gt;
	&lt;li&gt;The computation of cumulative SNR of strong emmission lines is fixed&lt;/li&gt;
&lt;/ul&gt;
</comment>
                            <comment id="37036" author="r2j.migrate" created="Tue, 6 Feb 2024 18:21:49 +0000"  >&lt;p&gt;Comment by Didier Vibert on 2024-01-16 15:50:27:&lt;br/&gt;
c&apos;est bon pour moi&lt;/p&gt;</comment>
                            <comment id="37037" author="r2j.migrate" created="Tue, 6 Feb 2024 18:21:53 +0000"  >&lt;p&gt;Comment by Pierre-yves Chabaud on 2024-01-17 08:59:13:&lt;br/&gt;
&lt;a href=&quot;https://gitlab.lam.fr/CPF/cpf-redshift/-/merge_requests/573&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;https://gitlab.lam.fr/CPF/cpf-redshift/-/merge_requests/573&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="37038" author="r2j.migrate" created="Tue, 6 Feb 2024 18:21:58 +0000"  >&lt;p&gt;Comment by Pierre-yves Chabaud on 2024-01-17 10:03:24:&lt;br/&gt;
Merged into @develop@ (@6f3e9a3a@)&lt;/p&gt;</comment>
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