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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[REDMINE1D-244] [RM-5497] CFHTLS training tests with high resolution photo-z added</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/REDMINE1D-244</link>
                <project id="11002" key="REDMINE1D">1D Redmine </project>
                    <description>&lt;p&gt;&lt;em&gt;&lt;font color=&quot;#505f79&quot;&gt; Created on 2019-12-18 17:50:49 by Marie Treyer. % Done: 0&lt;/font&gt;&lt;/em&gt;&lt;/p&gt;


&lt;p&gt;&lt;ins&gt;&lt;b&gt;TRAINING SAMPLE:&lt;/b&gt;&lt;/ins&gt;&lt;/p&gt;

&lt;p&gt;Stephane added high resolution photo-z + lower resolution spec-z to the initial SPEC only catalog that Johanna and Jerome previously used for training.&lt;br/&gt;
total = ~250k galaxies with i&amp;lt;25.5  + ~15k galaxies kept aside for testing (randomly picked but with smooth N(z) distribution).&lt;/p&gt;

&lt;p&gt;here&apos;s the mag/zspec and zspec distributions (&quot;zspec&quot; refers to the redshifts used for training even if there are zphot) :&lt;br/&gt;
&lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16055/16055_DENSITY.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt; &lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16057/16057_NZ.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt;&lt;/p&gt;

&lt;p&gt;&lt;ins&gt;&lt;b&gt;TRAINING TESTS:&lt;/b&gt;&lt;/ins&gt; &lt;/p&gt;

&lt;p&gt;model &quot;x&quot; (Jo&amp;amp;Je settings) : &lt;br/&gt;
learning rate = 0.0001 to iteration 150000&lt;br/&gt;
learning rate = 0.00001 from iteration 150000 to 300000&lt;br/&gt;
the model is saved at iteration 300k&lt;/p&gt;

&lt;p&gt;Given that the loss function and other parameters for the validation samples seem to reach a minimum far sooner than iteration 300k (see fig below), i tried these 2 things:&lt;/p&gt;

&lt;p&gt;model &quot;u&quot;: &lt;br/&gt;
learning rate = 0.0001 to iteration 80000&lt;br/&gt;
learning rate = 0.00001 from iteration 80000 to 200000&lt;br/&gt;
models are saved at iterations 100k, 130k, 160k, and 200k&lt;/p&gt;

&lt;p&gt;model &quot;v&quot;:&lt;br/&gt;
learning rate = 0.0001 to iteration 50000&lt;br/&gt;
learning rate = 0.00001 from iteration 50000 to 200000&lt;br/&gt;
models are saved at iterations 100k, 130k, 160k, and 200k&lt;/p&gt;

&lt;p&gt;Here&apos;s what&apos;s happening. There are 5 cross-validations for each model, the averages are shown in black. &lt;br/&gt;
M_square= &amp;lt;(zspec-zcnn_mean)**2.0&amp;gt;&lt;br/&gt;
bias = &amp;lt; (zcnn_mean-zspec)/(1+zspec) &amp;gt; as in our paper (the plot is incomplete because i added it to the code half way through the process).&lt;br/&gt;
I kept zcnn_mean (pdf weighted mean) because it&apos;s faster to compute, although the median gives better results.&lt;/p&gt;

&lt;p&gt;&lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16059/16059_VALIDATION_PERFS.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt; &lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16058/16058_TRAINING_PERFS.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt; &lt;/p&gt;

&lt;p&gt;&lt;ins&gt;&lt;b&gt;INFERENCES:&lt;/b&gt;&lt;/ins&gt; &lt;/p&gt;

&lt;p&gt;The performance at 160k and 200k for &quot;u&quot; and &quot;v&quot; are quasi similar, and only slightly better than at 100k. &lt;br/&gt;
Here&apos;s how the models compare for the test sample that was kept aside (ZCNN is the PDF median here) :&lt;br/&gt;
&lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16060/16060_DELTAZ_ZMED_TEST.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt; &lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16056/16056_SIGMA_ZMED_TEST.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt;&lt;br/&gt;
&lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16061/16061_ZSPEC_ZCNN_ilt235_TEST.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt; &lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16062/16062_ZSPEC_ZCNN_igt235_TEST.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt;&lt;br/&gt;
&lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16064/16064_NZ_TEST.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt; &lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/16063/16063_PIT_TEST.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/span&gt;&lt;/p&gt;

&lt;p&gt;The models aren&apos;t significantly different but the &quot;u&quot; (and even &quot;v&quot;) trainings run in half the time as &quot;x&quot; (~4h for 1 cross-validation versus ~8h). Also the PDFs are smoother. I wanted to show a random sample of PDFs as well as the distribution of local peaks (above 5%) for &quot;x&quot;, &quot;u&quot; and &quot;v&quot; but i seem to have exceeded my quota. Can we change this?  Also Jerome is not part of this group and Johanna&apos;s address will change soon, we need to do something about that too!&lt;/p&gt;





</description>
                <environment></environment>
        <key id="23662">REDMINE1D-244</key>
            <summary>[RM-5497] CFHTLS training tests with high resolution photo-z added</summary>
                <type id="3" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10518&amp;avatarType=issuetype">Task</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="1" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/open.png" description="The issue is open and ready for the assignee to start work on it.">Open</status>
                    <statusCategory id="2" key="new" colorName="blue-gray"/>
                                    <resolution id="-1">Unresolved</resolution>
                                        <assignee username="r2j.migrate">Redmine-Jira Migtation</assignee>
                                    <reporter username="r2j.migrate">Redmine-Jira Migtation</reporter>
                        <labels>
                    </labels>
                <created>Wed, 5 Jul 2023 17:29:51 +0000</created>
                <updated>Wed, 5 Jul 2023 17:31:14 +0000</updated>
                                                                                <due></due>
                            <votes>0</votes>
                                    <watches>1</watches>
                                                                <comments>
                            <comment id="33877" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:16 +0000"  >&lt;p&gt;Comment by Stephane Arnouts on 2019-12-18 18:32:02:&lt;/p&gt;

&lt;p&gt;&amp;gt; The models aren&apos;t significantly different but the &quot;u&quot; (and even &quot;v&quot;) trainings run in half the time as &quot;x&quot; (~4h for 1 cross-validation versus ~8h). Also the PDFs are smoother. I wanted to show a random sample of PDFs as well as the distribution of local peaks (above 5%) for &quot;x&quot;, &quot;u&quot; and &quot;v&quot; but i seem to have exceeded my quota. Can we change this?  Also Jerome is not part of this group and Johanna&apos;s address will change soon, we need to do something about that too!&lt;/p&gt;

&lt;p&gt; Great !  results appear quite similar between the 3 versions.  v model leads also larger PDF with a better PIT at the end.   In the stats there is also a mix of DEEP and WIDE images I guess, which should also be distinguished &lt;/p&gt;

&lt;p&gt; J&apos;ai ajout&#233; Jerome dans les membres du wiki !&lt;/p&gt;</comment>
                            <comment id="33878" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:18 +0000"  >&lt;p&gt;Comment by Stephane Arnouts on 2019-12-19 08:18:57:&lt;/p&gt;

&lt;p&gt;&amp;gt; &lt;ins&gt;&lt;b&gt;TRAINING TESTS:&lt;/b&gt;&lt;/ins&gt; &lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; model &quot;x&quot; (Jo&amp;amp;Je settings) : &lt;br/&gt;
&amp;gt; learning rate = 0.0001 to iteration 150000&lt;br/&gt;
&amp;gt; learning rate = 0.00001 from iteration 150000 to 300000&lt;br/&gt;
&amp;gt; the model is saved at iteration 300k&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; Given that the loss function and other parameters for the validation samples seem to reach a minimum far sooner than iteration 300k (see fig below), i tried these 2 things:&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; model &quot;u&quot;: &lt;br/&gt;
&amp;gt; learning rate = 0.0001 to iteration 80000&lt;br/&gt;
&amp;gt; learning rate = 0.00001 from iteration 80000 to 200000&lt;br/&gt;
&amp;gt; models are saved at iterations 100k, 130k, 160k, and 200k&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; model &quot;v&quot;:&lt;br/&gt;
&amp;gt; learning rate = 0.0001 to iteration 50000&lt;br/&gt;
&amp;gt; learning rate = 0.00001 from iteration 50000 to 200000&lt;br/&gt;
&amp;gt; models are saved at iterations 100k, 130k, 160k, and 200k&lt;br/&gt;
&amp;gt; &lt;br/&gt;
&amp;gt; Here&apos;s what&apos;s happening. There are 5 cross-validations for each model, the averages are shown in black. &lt;br/&gt;
&amp;gt; M_square= &amp;lt;(zspec-zcnn_mean)**2.0&amp;gt;&lt;br/&gt;
&amp;gt;&lt;br/&gt;
 It seems than the x-model from J&amp;amp;J miss the minimum before 150k and then degrades (in the loss and M^2) even with a smaller learning rate, in contrast to the u and v model. But the weird thing is  at the end the Sigma is still better for the x-model.  Is this normal ? &lt;br/&gt;
 When changing the learning rate there is a boost in the loss and sigma.  can we change the learning rate one more time to see if another gain appear after 100-200k iteration ?&lt;/p&gt;</comment>
                    </comments>
                    <attachments>
                            <attachment id="16060" name="DELTAZ_ZMED_TEST.png" size="32886" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:41 +0000"/>
                            <attachment id="16055" name="DENSITY.png" size="29643" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:21 +0000"/>
                            <attachment id="16057" name="NZ.png" size="10187" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:29 +0000"/>
                            <attachment id="16064" name="NZ_TEST.png" size="42213" author="r2j.migrate" created="Wed, 5 Jul 2023 17:31:11 +0000"/>
                            <attachment id="16063" name="PIT_TEST.png" size="23040" author="r2j.migrate" created="Wed, 5 Jul 2023 17:31:09 +0000"/>
                            <attachment id="16056" name="SIGMA_ZMED_TEST.png" size="35543" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:27 +0000"/>
                            <attachment id="16058" name="TRAINING_PERFS.png" size="90366" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:32 +0000"/>
                            <attachment id="16059" name="VALIDATION_PERFS.png" size="220578" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:37 +0000"/>
                            <attachment id="16062" name="ZSPEC_ZCNN_igt235_TEST.png" size="82230" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:59 +0000"/>
                            <attachment id="16061" name="ZSPEC_ZCNN_ilt235_TEST.png" size="80089" author="r2j.migrate" created="Wed, 5 Jul 2023 17:30:52 +0000"/>
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