<!-- 
RSS generated by JIRA (8.3.4#803005-sha1:1f96e09b3c60279a408a2ae47be3c745f571388b) at Sat Feb 10 15:59:10 JST 2024

It is possible to restrict the fields that are returned in this document by specifying the 'field' parameter in your request.
For example, to request only the issue key and summary append 'field=key&field=summary' to the URL of your request.
-->
<rss version="0.92" >
<channel>
    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
    </build-info>


<item>
            <title>[PIPE2D-870] Code implementation of the continuum subtraction task for flux calibration</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-870</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;Write a code to perform the continuum subtraction of spectra for flux calibration work in the 2DDRP pipeline. The draft code is based on the study in &lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-685&quot; title=&quot;Median filter to whiten an uncalibrated spectrum&quot; class=&quot;issue-link&quot; data-issue-key=&quot;PIPE2D-685&quot;&gt;&lt;del&gt;PIPE2D-685&lt;/del&gt;&lt;/a&gt; (&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-685&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-685&lt;/a&gt;), in which the continuum is subtracted by a median filter.&lt;/p&gt;</description>
                <environment></environment>
        <key id="16941">PIPE2D-870</key>
            <summary>Code implementation of the continuum subtraction task for flux calibration</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="sogo.mineo">sogo.mineo</assignee>
                                    <reporter username="takuji.yamashita">Takuji Yamashita</reporter>
                        <labels>
                            <label>flux-calibration</label>
                    </labels>
                <created>Mon, 19 Jul 2021 00:36:17 +0000</created>
                <updated>Tue, 14 Dec 2021 08:20:05 +0000</updated>
                            <resolved>Tue, 14 Dec 2021 08:20:05 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>3</watches>
                                                                <comments>
                            <comment id="21700" author="price" created="Mon, 19 Jul 2021 00:53:09 +0000"  >&lt;p&gt;Please consider the existing &lt;tt&gt;FitContinuumTask&lt;/tt&gt;.&lt;/p&gt;</comment>
                            <comment id="21701" author="takuji.yamashita" created="Mon, 19 Jul 2021 02:26:34 +0000"  >&lt;p&gt;Thank you. I will try it whether it works as I intend.&lt;/p&gt;</comment>
                            <comment id="21702" author="rhl" created="Mon, 19 Jul 2021 18:00:46 +0000"  >&lt;p&gt;If it doesn&apos;t, then we should look at what we need to change.  I really don&apos;t want to end up with two different fitting tasks if we can avoid it.&lt;/p&gt;</comment>
                            <comment id="21855" author="takuji.yamashita" created="Tue, 24 Aug 2021 07:08:23 +0000"  >&lt;p&gt;This is a comparison of two scripts for continuum subtraction. I tried fitContinuumTask (red) and my script that uses a median filter (blue). As a result, we can substitute fitContinuumTask in flux calibration work. A continuum from fitContinuumTask is very similar to that from my script.&lt;br/&gt;
What fitContinuumTask is doing is similar to mine, but fitContinuumTask performs pixel binning before fitting, while my script does not. Binning dismisses lines and outlier pixels. I think this is why fitContinuumTask works better than mine around H-alpha and H-beta.&lt;br/&gt;
&#160;&lt;br/&gt;
&#160;&lt;br/&gt;
From the top panel:&lt;br/&gt;
1st: two continua and an input spectrum&lt;br/&gt;
2nd: only two continua&lt;br/&gt;
3rd: continuum-subtracted spectra&lt;br/&gt;
4th: zoom-in of 3rd panel (see H-alpha, where my script underestimates the continuum)&lt;br/&gt;
5th: a ratio of two continua&lt;br/&gt;
&lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;a id=&quot;13970_thumb&quot; href=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/13970/13970_lines_mask_50knots.png&quot; title=&quot;lines_mask_50knots.png&quot; file-preview-type=&quot;image&quot; file-preview-id=&quot;13970&quot; file-preview-title=&quot;lines_mask_50knots.png&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/thumbnail/13969/_thumb_13969.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/a&gt;&lt;/span&gt;&lt;br/&gt;
&#160;&lt;/p&gt;</comment>
                            <comment id="21856" author="takuji.yamashita" created="Tue, 24 Aug 2021 07:08:39 +0000"  >&lt;p&gt;Comparisons around representive lines:&lt;br/&gt;
&lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;a id=&quot;13970_thumb&quot; href=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/13970/13970_lines_mask_50knots.png&quot; title=&quot;lines_mask_50knots.png&quot; file-preview-type=&quot;image&quot; file-preview-id=&quot;13970&quot; file-preview-title=&quot;lines_mask_50knots.png&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/thumbnail/13970/_thumb_13970.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;</comment>
                            <comment id="25730" author="takuji.yamashita" created="Tue, 14 Dec 2021 08:20:05 +0000"  >&lt;p&gt;We can close this ticket because a function of the continuum subtraction (using FitContinuumTask) is now included in the main code of flux calibration, not an independent code. The continuum subtraction function in flux calibration will be reviewed in the main code&#160;(&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-922&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;PIPE2D-922&lt;/a&gt;).&#160;&lt;/p&gt;</comment>
                    </comments>
                <issuelinks>
                            <issuelinktype id="10000">
                    <name>Blocks</name>
                                            <outwardlinks description="blocks">
                                        <issuelink>
            <issuekey id="13369">PIPE2D-371</issuekey>
        </issuelink>
                            </outwardlinks>
                                                        </issuelinktype>
                    </issuelinks>
                <attachments>
                            <attachment id="13970" name="lines_mask_50knots.png" size="222982" author="takuji.yamashita" created="Tue, 24 Aug 2021 07:06:02 +0000"/>
                            <attachment id="13969" name="mask_50knots.png" size="632556" author="takuji.yamashita" created="Tue, 24 Aug 2021 07:05:59 +0000"/>
                    </attachments>
                <subtasks>
                    </subtasks>
                <customfields>
                                                                            <customfield id="customfield_10500" key="com.atlassian.jira.plugins.jira-development-integration-plugin:devsummary">
                        <customfieldname>Development</customfieldname>
                        <customfieldvalues>
                            
                        </customfieldvalues>
                    </customfield>
                                                                <customfield id="customfield_10006" key="com.pyxis.greenhopper.jira:gh-epic-link">
                        <customfieldname>Epic Link</customfieldname>
                        <customfieldvalues>
                            <customfieldvalue>PIPE2D-303</customfieldvalue>
                        </customfieldvalues>
                    </customfield>
                                                                                                                                                                                <customfield id="customfield_10010" key="com.pyxis.greenhopper.jira:gh-lexo-rank">
                        <customfieldname>Rank</customfieldname>
                        <customfieldvalues>
                            <customfieldvalue>0|zzs8zc:</customfieldvalue>

                        </customfieldvalues>
                    </customfield>
                                                                                            <customfield id="customfield_10100" key="com.atlassian.jira.plugin.system.customfieldtypes:userpicker">
                        <customfieldname>Reviewers</customfieldname>
                        <customfieldvalues>
                            <customfieldvalue>hassan</customfieldvalue>

                        </customfieldvalues>
                    </customfield>
                                                                                                                                                                                </customfields>
    </item>
</channel>
</rss>