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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
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        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[PIPE2D-846] Draw the skeleton of the code integration for the flux calibration</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-846</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;Make a skeleton of the flux calibration code in the pipeline based on the current codes (&lt;a href=&quot;https://github.com/Subaru-PFS/drp_stella/blob/master/python/pfs/drp/stella/calculateReferenceFlux.py&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;calculateReferenceFlux&lt;/a&gt; and &lt;a href=&quot;https://github.com/Subaru-PFS/drp_stella/blob/master/python/pfs/drp/stella/fluxCalibrate.py&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;fluxCalibrate&lt;/a&gt;) and a set of the codes in the flux calibration studies. The document of the skeleton will be provided.&#160;&lt;/p&gt;

&lt;p&gt;&#160;The attached file (fluxCalibrationFlow_20210525.pdf) is a current rough draft. In this version, the framework (or the process flow) in the existing codes in the pipeline is not considered yet.&#160;&lt;/p&gt;

&lt;p&gt;&#160;This task is addressed with the help of Mineo-san.&#160;&lt;/p&gt;</description>
                <environment></environment>
        <key id="16063">PIPE2D-846</key>
            <summary>Draw the skeleton of the code integration for the flux calibration</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="takuji.yamashita">Takuji Yamashita</assignee>
                                    <reporter username="takuji.yamashita">Takuji Yamashita</reporter>
                        <labels>
                            <label>flux-calibration</label>
                    </labels>
                <created>Tue, 25 May 2021 02:16:03 +0000</created>
                <updated>Fri, 28 Jan 2022 17:16:27 +0000</updated>
                            <resolved>Wed, 16 Jun 2021 00:13:55 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>5</watches>
                                                                <comments>
                            <comment id="21389" author="takuji.yamashita" created="Mon, 7 Jun 2021 08:45:22 +0000"  >&lt;p&gt;Here is an updated process flow of the flux calibration.&lt;/p&gt;

&lt;p&gt;&lt;span class=&quot;nobr&quot;&gt;&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/13885/13885_fluxCalibrationFlow_20210607.pdf&quot; title=&quot;fluxCalibrationFlow_20210607.pdf attached to PIPE2D-846&quot;&gt;fluxCalibrationFlow_20210607.pdf&lt;sup&gt;&lt;img class=&quot;rendericon&quot; src=&quot;https://pfspipe.ipmu.jp/jira/images/icons/link_attachment_7.gif&quot; height=&quot;7&quot; width=&quot;7&quot; align=&quot;absmiddle&quot; alt=&quot;&quot; border=&quot;0&quot;/&gt;&lt;/sup&gt;&lt;/a&gt;&lt;/span&gt;&lt;/p&gt;

&lt;p&gt;&#160;&lt;/p&gt;

&lt;p&gt;The blue part is a set of tasks to find the best fit model of a flux standard, while the yellow is to apply the flux calibration to a science target.&#160;&lt;/p&gt;

&lt;p&gt;In the current pipeline, the main processes are done in fitReference.py and&#160;measureFluxCalibration.py. They are now placeholders.&#160;Individual tasks (square boxes in the flow chart) will be written either in fitReference.py or&#160; measureFluxCalibration.py. The naming is tentative.&#160;&#160;&lt;/p&gt;

&lt;p&gt;&#160;&lt;/p&gt;</comment>
                            <comment id="21469" author="takuji.yamashita" created="Fri, 11 Jun 2021 00:22:31 +0000"  >&lt;p&gt;&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=price&quot; class=&quot;user-hover&quot; rel=&quot;price&quot;&gt;price&lt;/a&gt;,&#160;&lt;/p&gt;

&lt;p&gt;Does the updated flow chart include enough information to share the code integration concept and to be reviewed for you?&lt;/p&gt;

&lt;p&gt;We can discuss something about writing here with Mineo-san or do that when we need.&#160;&lt;/p&gt;</comment>
                            <comment id="21470" author="price" created="Fri, 11 Jun 2021 01:01:09 +0000"  >&lt;p&gt;It looks very reasonable.&lt;/p&gt;</comment>
                            <comment id="21471" author="sogo.mineo" created="Fri, 11 Jun 2021 01:19:51 +0000"  >&lt;p&gt;The flowcharts are enough to start writing codes. Should we directly modify the classes in drp_stella, or make subclasses to implement the flowcharts? In the latter case, should we add files to drp_stella or obs_pfs? If these codes work only for PFS (I don&apos;t know whether or not), will it still be OK for these codes to reside in drp_stella?&lt;/p&gt;</comment>
                            <comment id="21472" author="price" created="Fri, 11 Jun 2021 03:14:34 +0000"  >&lt;p&gt;I think you should start by subclassing. We can clobber the current code once you&apos;ve demonstrated that it works on the simulated data.&lt;br/&gt;
You can add data files to the drp_pfs_data package.&lt;/p&gt;</comment>
                            <comment id="21492" author="takuji.yamashita" created="Wed, 16 Jun 2021 00:06:42 +0000"  >&lt;p&gt;Could you review the skeleton (fluxCalibrationFlow_20210607.pdf) of the flux calibration integration?&#160;&lt;/p&gt;</comment>
                            <comment id="21493" author="price" created="Wed, 16 Jun 2021 00:12:50 +0000"  >&lt;p&gt;I reviewed it previously, and it looks good.&lt;/p&gt;</comment>
                            <comment id="21494" author="takuji.yamashita" created="Wed, 16 Jun 2021 00:13:55 +0000"  >&lt;p&gt;Thanks for your review. We close this ticket.&#160;&lt;/p&gt;</comment>
                    </comments>
                    <attachments>
                            <attachment id="13598" name="fluxCalibrationFlow_20210525.pdf" size="22555" author="takuji.yamashita" created="Tue, 25 May 2021 02:09:47 +0000"/>
                            <attachment id="13885" name="fluxCalibrationFlow_20210607.pdf" size="23241" author="takuji.yamashita" created="Mon, 7 Jun 2021 08:25:00 +0000"/>
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