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    <link>https://pfspipe.ipmu.jp/jira</link>
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        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[PIPE2D-785] Add option to use tweaked detectorMap to define fiberProfiles</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-785</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;Looking at the discrepancies between the detectorMap and the fiberProfile centres shows that the Chebyshev fit to the x-centres is pretty good, but not perfect. &#160;Using the detectorMap (probably with an affine distortion) would be better. &#160;The figure  &lt;span class=&quot;image-wrap&quot; style=&quot;&quot;&gt;&lt;a id=&quot;13426_thumb&quot; href=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/13426/13426_quiver-46188-fiberTrace.png&quot; title=&quot;quiver-46188-fiberTrace.png&quot; file-preview-type=&quot;image&quot; file-preview-id=&quot;13426&quot; file-preview-title=&quot;quiver-46188-fiberTrace.png&quot;&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/secure/thumbnail/13426/_thumb_13426.png&quot; style=&quot;border: 0px solid black&quot; /&gt;&lt;/a&gt;&lt;/span&gt; shows every fifth fibre, and clearly some of the fits are a bit off (much worse in the dense-pack region). &#160;Using the black spots will help here, of course, but a global distortion would probably be better.&lt;/p&gt;</description>
                <environment></environment>
        <key id="15473">PIPE2D-785</key>
            <summary>Add option to use tweaked detectorMap to define fiberProfiles</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="price">price</assignee>
                                    <reporter username="rhl">rhl</reporter>
                        <labels>
                    </labels>
                <created>Tue, 16 Mar 2021 20:54:33 +0000</created>
                <updated>Fri, 26 Mar 2021 15:29:21 +0000</updated>
                            <resolved>Fri, 26 Mar 2021 15:29:21 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>3</watches>
                                                                <comments>
                            <comment id="18874" author="price" created="Tue, 16 Mar 2021 21:19:51 +0000"  >&lt;p&gt;I think the default &lt;tt&gt;profiles.centroidRadius=5&lt;/tt&gt; is too large to work well in the dense fiber region. The other features look smooth, and could be fixed using a higher order polynomial (currently &lt;tt&gt;profiles.centerFit.order=9&lt;/tt&gt;).&lt;/p&gt;</comment>
                            <comment id="18875" author="rhl" created="Tue, 16 Mar 2021 21:28:09 +0000"  >&lt;p&gt;Maybe we&apos;d get away with that, but ignoring the detectorMap in favour of a per-fibre fit is the wrong thing to do.&lt;/p&gt;</comment>
                            <comment id="18974" author="price" created="Thu, 25 Mar 2021 17:38:15 +0000"  >&lt;p&gt;Ready for review.&lt;/p&gt;</comment>
                            <comment id="18975" author="hassan" created="Thu, 25 Mar 2021 18:22:27 +0000"  >&lt;p&gt;This looks fine. Minor comments in the pull request. One question:  is the adjusted detectorMap persisted? I could not see that. May be useful for debugging to have that option. &lt;/p&gt;</comment>
                            <comment id="18976" author="price" created="Thu, 25 Mar 2021 18:56:15 +0000"  >&lt;p&gt;The detectorMap isn&apos;t adjusted: the trace positions are.&lt;/p&gt;</comment>
                            <comment id="18977" author="rhl" created="Thu, 25 Mar 2021 20:38:53 +0000"  >&lt;p&gt;I think Hassan&apos;s request is reasonable, but possibly a different ticket. &#160;Currently only arcs can be used to adjust the positions of the traces in the DetectorMap, and this is a problem for e.g. the SuNSS blue arm where we have decent quartzes but only very sparse arcs (especially before we found out about &quot;dome arcs&quot;). &#160;Obviously you can only update the wavelengths directly by using the arcs, but in reality I suspect that you can do a pretty good job just off the traces (or will, once we understand the space of distortions in the cameras)&lt;/p&gt;</comment>
                            <comment id="19000" author="price" created="Fri, 26 Mar 2021 15:09:28 +0000"  >&lt;p&gt;Created &lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-796&quot; title=&quot;Allow adjustment of detectorMap in reduceExposure&quot; class=&quot;issue-link&quot; data-issue-key=&quot;PIPE2D-796&quot;&gt;&lt;del&gt;PIPE2D-796&lt;/del&gt;&lt;/a&gt;: Allow adjustment of detectorMap in reduceExposure.&lt;/p&gt;</comment>
                            <comment id="19002" author="price" created="Fri, 26 Mar 2021 15:29:21 +0000"  >&lt;p&gt;Merged.&lt;/p&gt;</comment>
                    </comments>
                    <attachments>
                            <attachment id="13426" name="quiver-46188-fiberTrace.png" size="494835" author="rhl" created="Tue, 16 Mar 2021 20:52:04 +0000"/>
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