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    <title>PFS-JIRA</title>
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        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[PIPE2D-656] Generate/update headerFix files based on opDb spsAnnotation.data_flag</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-656</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;We have, I believe, agreed to use the opDb &lt;tt&gt;sps_annotation&lt;/tt&gt; table to record bad PFS raw data files.  Basically, if there is a row for the (visit, cam) and the &lt;tt&gt;data_flag&lt;/tt&gt; column is not the &quot;OK&quot; value, the data should not be reduced.&lt;/p&gt;

&lt;p&gt;Mineo-san&apos;s scripts already use the &lt;tt&gt;sps_annotation&lt;/tt&gt; table to drive reductions. This change would apply to files which are not processed by that engine.&lt;/p&gt;

&lt;p&gt;DRP uses a &quot;headerFix&quot; mechanism to track edits to header cards, which are applied when the file is read in: the raw data files are not themselves edited. This could be used to add a card indicating that the data are bad, in which case most of the machinery is already in place.&lt;/p&gt;

&lt;p&gt;So:&lt;/p&gt;
&lt;ul class=&quot;alternate&quot; type=&quot;square&quot;&gt;
	&lt;li&gt;agree on how/when opDb data is propagated&lt;/li&gt;
	&lt;li&gt;settle on a data quality card for the DRP.&lt;/li&gt;
	&lt;li&gt;arrange for ingest &lt;img class=&quot;emoticon&quot; src=&quot;https://pfspipe.ipmu.jp/jira/images/icons/emoticons/help_16.png&quot; height=&quot;16&quot; width=&quot;16&quot; align=&quot;absmiddle&quot; alt=&quot;&quot; border=&quot;0&quot;/&gt; or the first isr stage to skip bad files&lt;/li&gt;
	&lt;li&gt;write opDb -&amp;gt; headerFix script&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;This is probably just an RFC ticket, until the right people check off on it...&lt;/p&gt;</description>
                <environment></environment>
        <key id="15044">PIPE2D-656</key>
            <summary>Generate/update headerFix files based on opDb spsAnnotation.data_flag</summary>
                <type id="3" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10518&amp;avatarType=issuetype">Task</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="1" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/open.png" description="The issue is open and ready for the assignee to start work on it.">Open</status>
                    <statusCategory id="2" key="new" colorName="blue-gray"/>
                                    <resolution id="-1">Unresolved</resolution>
                                        <assignee username="-1">Unassigned</assignee>
                                    <reporter username="cloomis">cloomis</reporter>
                        <labels>
                            <label>opDB</label>
                    </labels>
                <created>Fri, 20 Nov 2020 18:46:06 +0000</created>
                <updated>Fri, 6 Jan 2023 13:01:09 +0000</updated>
                                                                                <due></due>
                            <votes>0</votes>
                                    <watches>2</watches>
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