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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[PIPE2D-609] Polish generateCommands.py</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-609</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;In the process of using &lt;tt&gt;generateCommands.py&lt;/tt&gt;, I&apos;ve noticed some behaviours which deserve addressing:&lt;/p&gt;

&lt;ul&gt;
	&lt;li&gt;I can&apos;t specify multiple types via &lt;tt&gt;&amp;#45;&amp;#45;calibTypes&lt;/tt&gt;.&lt;/li&gt;
	&lt;li&gt;If the particular calib has already been ingested, the generated script fails (&lt;tt&gt;RuntimeError: File ... already exists; consider --config clobber=True&lt;/tt&gt;) despite &lt;tt&gt;&amp;#45;&amp;#45;force&lt;/tt&gt;, and I&apos;m unaware of any means of setting &lt;tt&gt;clobber=True&lt;/tt&gt; in the ingestion.&lt;/li&gt;
	&lt;li&gt;If I have a local subdirectory &lt;tt&gt;CALIB&lt;/tt&gt;, running &lt;tt&gt;generateCommands.py /path/to/DATA/ --calib CALIB ...&lt;/tt&gt; sets the calibration directory to &lt;tt&gt;/path/to/DATA/CALIB&lt;/tt&gt; rather than &lt;tt&gt;CALIB&lt;/tt&gt;.&lt;/li&gt;
&lt;/ul&gt;
</description>
                <environment></environment>
        <key id="14526">PIPE2D-609</key>
            <summary>Polish generateCommands.py</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="sogo.mineo">sogo.mineo</assignee>
                                    <reporter username="price">price</reporter>
                        <labels>
                    </labels>
                <created>Mon, 22 Jun 2020 19:58:34 +0000</created>
                <updated>Mon, 4 Jan 2021 20:23:19 +0000</updated>
                            <resolved>Thu, 25 Jun 2020 02:28:36 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>2</watches>
                                                                <comments>
                            <comment id="17362" author="sogo.mineo" created="Tue, 23 Jun 2020 00:14:12 +0000"  >&lt;ul&gt;
	&lt;li&gt;To pass two or more arguments to &lt;tt&gt;&amp;#45;&amp;#45;calibTypes&lt;/tt&gt;, write &lt;tt&gt;&amp;#45;&amp;#45;calibTypes arg1 arg2 arg3 ...&lt;/tt&gt;.&lt;/li&gt;
	&lt;li&gt;I don&apos;t think it is good to give &lt;tt&gt;--force&lt;/tt&gt; two different functions: one for script generation and another for script execution. I would suggest adding &lt;tt&gt;&amp;#45;&amp;#45;clobber-calib&lt;/tt&gt;.&lt;/li&gt;
	&lt;li&gt;What &lt;tt&gt;&amp;#45;&amp;#45;calib&lt;/tt&gt; is relative to is confusing indeed. I will change it.&lt;/li&gt;
&lt;/ul&gt;
</comment>
                            <comment id="17366" author="sogo.mineo" created="Wed, 24 Jun 2020 02:43:26 +0000"  >&lt;ul&gt;
	&lt;li&gt;&lt;tt&gt;&amp;#45;&amp;#45;calib&lt;/tt&gt; is now relative to &lt;tt&gt;$PWD&lt;/tt&gt;.&lt;/li&gt;
	&lt;li&gt;Added &lt;tt&gt;&amp;#45;&amp;#45;overwriteCalib&lt;/tt&gt; option. With this option, &lt;tt&gt;ingestPsfCalibs.py&lt;/tt&gt; will overwrite old calibs instead of raising an exception.&lt;/li&gt;
&lt;/ul&gt;
</comment>
                            <comment id="17372" author="sogo.mineo" created="Thu, 25 Jun 2020 02:28:37 +0000"  >&lt;p&gt;Thanks for review. I added a check that &lt;tt&gt;calib&lt;/tt&gt; exists, renamed &lt;tt&gt;outputCalibType&lt;/tt&gt; to &lt;tt&gt;outputSubdir&lt;/tt&gt;, and merged this branch to master.&lt;/p&gt;</comment>
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