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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
    </build-info>


<item>
            <title>[PIPE2D-579] IndexError in reduceArc</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-579</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;&lt;a href=&quot;https://jenkins.princeton.edu/job/Sumire/job/Prime%20Focus%20Spectrograph/job/weekly/11/console&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;The weekly&lt;/a&gt; failed with an &lt;tt&gt;IndexError&lt;/tt&gt; in &lt;tt&gt;reduceArc&lt;/tt&gt;:&lt;/p&gt;
&lt;div class=&quot;code panel&quot; style=&quot;border-width: 1px;&quot;&gt;&lt;div class=&quot;codeContent panelContent&quot;&gt;
&lt;pre class=&quot;code-java&quot;&gt;
reduceArc FATAL: Failed on dataId={&lt;span class=&quot;code-quote&quot;&gt;&apos;visit&apos;&lt;/span&gt;: 41, &lt;span class=&quot;code-quote&quot;&gt;&apos;dateObs&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;2020-04-22&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;site&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;F&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;category&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;A&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;arm&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;r&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;spectrograph&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;field&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;ARC&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;ccd&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;filter&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;r&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;expTime&apos;&lt;/span&gt;: 5.0, &lt;span class=&quot;code-quote&quot;&gt;&apos;dataType&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;ARC&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;taiObs&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;2020-04-22&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;pfsDesignId&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;slitOffset&apos;&lt;/span&gt;: 0.0}: IndexError: index 4553 is out of bounds &lt;span class=&quot;code-keyword&quot;&gt;for&lt;/span&gt; axis 0 with size 4176
Traceback (most recent call last):
  File &lt;span class=&quot;code-quote&quot;&gt;&quot;/scratch/pprice/jenkins/weekly/2020-05-11/build/stack/miniconda3-4.5.12-1172c30/Linux64/pipe_base/18.1.0/python/lsst/pipe/base/cmdLineTask.py&quot;&lt;/span&gt;, line 388, in __call__
    result = self.runTask(task, dataRef, kwargs)
  File &lt;span class=&quot;code-quote&quot;&gt;&quot;/scratch/pprice/jenkins/weekly/2020-05-11/build/stack/miniconda3-4.5.12-1172c30/Linux64/pipe_base/18.1.0/python/lsst/pipe/base/cmdLineTask.py&quot;&lt;/span&gt;, line 447, in runTask
    &lt;span class=&quot;code-keyword&quot;&gt;return&lt;/span&gt; task.runDataRef(dataRef, **kwargs)
  File &lt;span class=&quot;code-quote&quot;&gt;&quot;/scratch/pprice/jenkins/weekly/2020-05-11/build/stack/miniconda3-4.5.12-1172c30/Linux64/drp_stella/5.1.0-154-g1f188d6+1/python/pfs/drp/stella/reduceArcTask.py&quot;&lt;/span&gt;, line 191, in runDataRef
    self.identifyLines.run(spectra, detectorMap, lines)
  File &lt;span class=&quot;code-quote&quot;&gt;&quot;/scratch/pprice/jenkins/weekly/2020-05-11/build/stack/miniconda3-4.5.12-1172c30/Linux64/drp_stella/5.1.0-154-g1f188d6+1/python/pfs/drp/stella/identifyLines.py&quot;&lt;/span&gt;, line 49, in run
    self.identifyLines(spec, detectorMap, lines)
  File &lt;span class=&quot;code-quote&quot;&gt;&quot;/scratch/pprice/jenkins/weekly/2020-05-11/build/stack/miniconda3-4.5.12-1172c30/Linux64/drp_stella/5.1.0-154-g1f188d6+1/python/pfs/drp/stella/identifyLines.py&quot;&lt;/span&gt;, line 85, in identifyLines
    obsLines = sorted(obsLines, key=lambda xx: spectrum.spectrum[&lt;span class=&quot;code-object&quot;&gt;int&lt;/span&gt;(xx + 0.5)], reverse=True)
  File &lt;span class=&quot;code-quote&quot;&gt;&quot;/scratch/pprice/jenkins/weekly/2020-05-11/build/stack/miniconda3-4.5.12-1172c30/Linux64/drp_stella/5.1.0-154-g1f188d6+1/python/pfs/drp/stella/identifyLines.py&quot;&lt;/span&gt;, line 85, in &amp;lt;lambda&amp;gt;
    obsLines = sorted(obsLines, key=lambda xx: spectrum.spectrum[&lt;span class=&quot;code-object&quot;&gt;int&lt;/span&gt;(xx + 0.5)], reverse=True)
IndexError: index 4553 is out of bounds &lt;span class=&quot;code-keyword&quot;&gt;for&lt;/span&gt; axis 0 with size 4176
&lt;/pre&gt;
&lt;/div&gt;&lt;/div&gt;</description>
                <environment></environment>
        <key id="14384">PIPE2D-579</key>
            <summary>IndexError in reduceArc</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="price">price</assignee>
                                    <reporter username="price">price</reporter>
                        <labels>
                    </labels>
                <created>Mon, 11 May 2020 18:12:52 +0000</created>
                <updated>Mon, 11 May 2020 20:45:17 +0000</updated>
                            <resolved>Mon, 11 May 2020 20:45:17 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>1</watches>
                                                                <comments>
                            <comment id="17129" author="price" created="Mon, 11 May 2020 19:56:28 +0000"  >&lt;p&gt;It was one line with a bad centroid messing it up for everyone.&lt;/p&gt;</comment>
                            <comment id="17130" author="price" created="Mon, 11 May 2020 20:45:17 +0000"  >&lt;p&gt;Merged to master.&lt;/p&gt;</comment>
                    </comments>
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