<!-- 
RSS generated by JIRA (8.3.4#803005-sha1:1f96e09b3c60279a408a2ae47be3c745f571388b) at Sat Feb 10 15:54:53 JST 2024

It is possible to restrict the fields that are returned in this document by specifying the 'field' parameter in your request.
For example, to request only the issue key and summary append 'field=key&field=summary' to the URL of your request.
-->
<rss version="0.92" >
<channel>
    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
    </build-info>


<item>
            <title>[PIPE2D-563] Sub-pixel Interpolation of PSF image for analysis of FRD</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-563</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;Residuals between spectrograph PSF images at different FRD are dominated by a dipole structure that indicates a shift between centroids of the images. The absolute position of the simulated PSFs is held constant between these images in the current version of the 2D-DRP code. That is, centroid shift is real and due to the changing FRD. However, in the spectrograph calculations are made relative to the centroid of the image. Thus, for a consistent analysis of the FRD effect on the spectrograph images, the centroid must be the same between images.&lt;/p&gt;</description>
                <environment></environment>
        <key id="14346">PIPE2D-563</key>
            <summary>Sub-pixel Interpolation of PSF image for analysis of FRD</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="bbelland">Brent Belland</assignee>
                                    <reporter username="bbelland">Brent Belland</reporter>
                        <labels>
                    </labels>
                <created>Wed, 22 Apr 2020 15:26:05 +0000</created>
                <updated>Mon, 4 Jan 2021 20:23:16 +0000</updated>
                            <resolved>Mon, 27 Apr 2020 21:29:10 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>1</watches>
                                                                <comments>
                            <comment id="17077" author="bbelland" created="Wed, 22 Apr 2020 16:02:17 +0000"  >&lt;p&gt;Pixel-level interpolation was tested to resolve the centroid shift issue. Pixel alignment worked correctly; however, centroids shift on hundredth of a pixel scales between PSFs of different FRDs in the spectrograph images. Sub-pixel alignment, thus requiring implementation of an interpolator, is thus required. Options for interpolation are currently being investigated.&#160;&lt;/p&gt;

&lt;p&gt;To understand the effect of alignment in more detail, simulation images before downsampling were used.&#160;One_pixel_offset_simulation.png demonstrates the characteristic residual from centroid misalignment, while&#160;One_pixel_offset_spectrograph.png demonstrates the downsampled result (which is a dipole; this is why the FRD image residuals being dipole-dominated indicated centroid misalignment). For comparison,&#160;6mrad_9mrad_simulation.png indicates the residual between images with 6 mrad and 9 mrad FRD. Notably, this structure is different than that of the misalignment residual, giving hope to the prospect of extracting FRD from these images even after centroid alignment. However, the downsampled spectrograph image&#160;6mrad_9mrad_spectrograph.png is also dominated by the dipole shape.&lt;/p&gt;</comment>
                            <comment id="17100" author="bbelland" created="Mon, 27 Apr 2020 19:49:01 +0000"  >&lt;p&gt;The function &lt;a href=&quot;https://docs.scipy.org/doc/scipy-0.14.0/reference/generated/scipy.ndimage.interpolation.shift.html#scipy.ndimage.interpolation.shift&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;scipy.ndimage.interpolation.shift&lt;/a&gt;&#160;was found to appropriately reproduce pixel-order shifts and also found to successfully interpolate in order to shift sub-pixel distances utilizing third-order spline interpolation. SubpixelScaling.png demonstrates that the subpixel shift gives an appropriate residual magnitude relative to the residual magnitude in the relatively simple pixel shift image. Utilizing this function solves this issue.&#160;&lt;/p&gt;</comment>
                            <comment id="17103" author="bbelland" created="Mon, 27 Apr 2020 21:29:10 +0000"  >&lt;p&gt;Code that solves this issue has been found and implemented into Brent&apos;s FRD analysis.&lt;/p&gt;</comment>
                    </comments>
                <issuelinks>
                            <issuelinktype id="10003">
                    <name>Relates</name>
                                                                <inwardlinks description="relates to">
                                        <issuelink>
            <issuekey id="14317">PIPE2D-548</issuekey>
        </issuelink>
            <issuelink>
            <issuekey id="14318">PIPE2D-549</issuekey>
        </issuelink>
                            </inwardlinks>
                                    </issuelinktype>
                    </issuelinks>
                <attachments>
                            <attachment id="12645" name="6mrad_9mrad_simulation.png" size="11495" author="bbelland" created="Wed, 22 Apr 2020 16:02:04 +0000"/>
                            <attachment id="12646" name="6mrad_9mrad_spectrograph.png" size="10785" author="bbelland" created="Wed, 22 Apr 2020 16:02:04 +0000"/>
                            <attachment id="12647" name="One_pixel_offset_simulation.png" size="11395" author="bbelland" created="Wed, 22 Apr 2020 16:02:04 +0000"/>
                            <attachment id="12648" name="One_pixel_offset_spectrograph.png" size="10019" author="bbelland" created="Wed, 22 Apr 2020 16:02:04 +0000"/>
                            <attachment id="12657" name="SubpixelScaling.png" size="22177" author="bbelland" created="Mon, 27 Apr 2020 19:48:49 +0000"/>
                    </attachments>
                <subtasks>
                    </subtasks>
                <customfields>
                                                                            <customfield id="customfield_10500" key="com.atlassian.jira.plugins.jira-development-integration-plugin:devsummary">
                        <customfieldname>Development</customfieldname>
                        <customfieldvalues>
                            
                        </customfieldvalues>
                    </customfield>
                                                                                                                                                                                                            <customfield id="customfield_10010" key="com.pyxis.greenhopper.jira:gh-lexo-rank">
                        <customfieldname>Rank</customfieldname>
                        <customfieldvalues>
                            <customfieldvalue>0|02qps1:0o</customfieldvalue>

                        </customfieldvalues>
                    </customfield>
                                                                                                                        <customfield id="customfield_10005" key="com.pyxis.greenhopper.jira:gh-sprint">
                        <customfieldname>Sprint</customfieldname>
                        <customfieldvalues>
                                <customfieldvalue id="93">2DDRP-2021 A</customfieldvalue>

                        </customfieldvalues>
                    </customfield>
                                                                                                                                                    </customfields>
    </item>
</channel>
</rss>