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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
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        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[PIPE2D-481] Problems generating flat calibration data</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-481</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;This is on behalf of &lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=fmadec&quot; class=&quot;user-hover&quot; rel=&quot;fmadec&quot;&gt;fmadec&lt;/a&gt; who on 2019-11-13  reported the issue on the drp-2d channel on slack when trying to produce a flat calib:&lt;/p&gt;

&lt;div class=&quot;code panel&quot; style=&quot;border-width: 1px;&quot;&gt;&lt;div class=&quot;codeContent panelContent&quot;&gt;
&lt;pre class=&quot;code-java&quot;&gt;
but CameraMapper INFO: Loading calib registry from /home/fmadec/pfs/drpData/CALIB/calibRegistry.sqlite3
14881 INFO  2019-11-13T17:19:16.649+0100 CameraMapper: Loading calib registry from /home/fmadec/pfs/drpData/CALIB/calibRegistry.sqlite3
fiberFlat INFO: Scatter combination
fiberFlat INFO: Combining 129 inputs {&lt;span class=&quot;code-quote&quot;&gt;&apos;arm&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;r&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;spectrograph&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;ccd&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;filter&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;b&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;calibDate&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;2019-07-25&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;visit0&apos;&lt;/span&gt;: 21127} on pfslam:14880
fiberFlat INFO: Dither values: [-0.20349, -0.20347, -0.19332, -0.19331, -0.18314, -0.17297, -0.16279, -0.15262, -0.14244, -0.13227, -0.12209, -0.11192, -0.10174, -0.09157, -0.08139, -0.07122, -0.06105, -0.06104, -0.05087, -0.0407, -0.03052, -0.02035, -0.01018, 0.0, 0.01017, 0.02035, 0.03052, 0.04069, 0.05087, 0.06104, 0.07122, 0.08139, 0.09157, 0.10174, 0.11191, 0.12209, 0.13226, 0.14244, 0.15261, 0.16279, 0.17296, 0.18314, 0.19331, 0.20348]
fiberFlat INFO: 10 FiberTraces found &lt;span class=&quot;code-keyword&quot;&gt;for&lt;/span&gt; DataId(initialdata={&lt;span class=&quot;code-quote&quot;&gt;&apos;visit&apos;&lt;/span&gt;: 21128, &lt;span class=&quot;code-quote&quot;&gt;&apos;arm&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;r&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;dateObs&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;2019-07-25&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;site&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;L&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;category&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;A&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;spectrograph&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;field&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;FLAT&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;ccd&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;filter&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;r&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;expTime&apos;&lt;/span&gt;: 14.996, &lt;span class=&quot;code-quote&quot;&gt;&apos;dataType&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;flat&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;taiObs&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;2019-07-25&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;pfsDesignId&apos;&lt;/span&gt;: 1099528409104, &lt;span class=&quot;code-quote&quot;&gt;&apos;slitOffset&apos;&lt;/span&gt;: 0.0}, tag=set())
fiberFlat INFO: 10 FiberTraces found &lt;span class=&quot;code-keyword&quot;&gt;for&lt;/span&gt; DataId(initialdata={&lt;span class=&quot;code-quote&quot;&gt;&apos;visit&apos;&lt;/span&gt;: 21132, &lt;span class=&quot;code-quote&quot;&gt;&apos;arm&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;r&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;dateObs&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;2019-07-25&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;site&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;L&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;category&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;A&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;spectrograph&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;field&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;FLAT&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;ccd&apos;&lt;/span&gt;: 1, &lt;span class=&quot;code-quote&quot;&gt;&apos;filter&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;r&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;expTime&apos;&lt;/span&gt;: 14.996, &lt;span class=&quot;code-quote&quot;&gt;&apos;dataType&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;flat&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;taiObs&apos;&lt;/span&gt;: &lt;span class=&quot;code-quote&quot;&gt;&apos;2019-07-25&apos;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&apos;pfsDesignId&apos;&lt;/span&gt;: 1099528409104, &lt;span class=&quot;code-quote&quot;&gt;&apos;slitOffset&apos;&lt;/span&gt;: 0.0}, tag=set())
Exception on pfslam:14880 in reduce: 
  File &lt;span class=&quot;code-quote&quot;&gt;&quot;src/math/CurveFitting.cc&quot;&lt;/span&gt;, line 326, in std::tuple&amp;lt;&lt;span class=&quot;code-object&quot;&gt;float&lt;/span&gt;, ImageT, ImageT, ImageT&amp;gt; pfs::drp::stella::math::{anonymous}::fitProfile1d(&lt;span class=&quot;code-keyword&quot;&gt;const&lt;/span&gt; ndarray::ArrayRef&amp;lt;&lt;span class=&quot;code-keyword&quot;&gt;const&lt;/span&gt; ImageT, 1, 1&amp;gt;&amp;amp;, &lt;span class=&quot;code-keyword&quot;&gt;const&lt;/span&gt; ndarray::ArrayRef&amp;lt;&lt;span class=&quot;code-keyword&quot;&gt;const&lt;/span&gt; ImageT, 1, 1&amp;gt;&amp;amp;, &lt;span class=&quot;code-keyword&quot;&gt;const&lt;/span&gt; ndarray::ArrayRef&amp;lt;bool, 1, 1&amp;gt;&amp;amp;, &lt;span class=&quot;code-keyword&quot;&gt;const&lt;/span&gt; ndarray::ArrayRef&amp;lt;ImageT, 1, 1&amp;gt;&amp;amp;, &lt;span class=&quot;code-object&quot;&gt;float&lt;/span&gt;, bool) [with ImageT = &lt;span class=&quot;code-object&quot;&gt;float&lt;/span&gt;]
    fitProfile1d:: i = 18: ERROR: dataVar(i) is not finite {0}
lsst::pex::exceptions::Exception: &lt;span class=&quot;code-quote&quot;&gt;&apos;fitProfile1d:: i = 18: ERROR: dataVar(i) is not finite&apos;&lt;/span&gt;
&lt;/pre&gt;
&lt;/div&gt;&lt;/div&gt;

&lt;p&gt;The command-line invocation was not explicitly mentioned, but inferring from earlier comments I believe it was:&lt;/p&gt;

&lt;div class=&quot;code panel&quot; style=&quot;border-width: 1px;&quot;&gt;&lt;div class=&quot;codeContent panelContent&quot;&gt;
&lt;pre class=&quot;code-java&quot;&gt;
pfs_build_calibs.sh -n -c 8 -r calibs -C DATA/CALIB -b visit=16562..16576 -d visit=16577..16606 -f &lt;span class=&quot;code-quote&quot;&gt;&apos;visit=16612..16740 arm=r&apos;&lt;/span&gt; -F &lt;span class=&quot;code-quote&quot;&gt;&apos;visit=16607..16611 arm=r&apos;&lt;/span&gt; DATA
&lt;/pre&gt;
&lt;/div&gt;&lt;/div&gt;

&lt;p&gt;&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=price&quot; class=&quot;user-hover&quot; rel=&quot;price&quot;&gt;price&lt;/a&gt; posted on slack that this problem may be fixed following &lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-391&quot; title=&quot;Generate fiberTraces from odd/even flats&quot; class=&quot;issue-link&quot; data-issue-key=&quot;PIPE2D-391&quot;&gt;&lt;del&gt;PIPE2D-391&lt;/del&gt;&lt;/a&gt;, but as that is a separate issue this ticket is raised to ensure this specific problem is tracked.&lt;/p&gt;</description>
                <environment></environment>
        <key id="14017">PIPE2D-481</key>
            <summary>Problems generating flat calibration data</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10100" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="No further work should be done on this.">Won&apos;t Fix</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="2">Won&apos;t Fix</resolution>
                                        <assignee username="price">price</assignee>
                                    <reporter username="hassan">hassan</reporter>
                        <labels>
                    </labels>
                <created>Wed, 27 Nov 2019 14:08:01 +0000</created>
                <updated>Mon, 4 Jan 2021 20:23:09 +0000</updated>
                            <resolved>Wed, 12 Feb 2020 02:45:43 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>1</watches>
                                                                <comments>
                            <comment id="16713" author="hassan" created="Wed, 12 Feb 2020 02:45:43 +0000"  >&lt;p&gt;Work fixed as part of &lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-507&quot; title=&quot;ConstructFiberFlat.py hangs against Subaru data&quot; class=&quot;issue-link&quot; data-issue-key=&quot;PIPE2D-507&quot;&gt;&lt;del&gt;PIPE2D-507&lt;/del&gt;&lt;/a&gt;.&lt;/p&gt;</comment>
                    </comments>
                <issuelinks>
                            <issuelinktype id="10002">
                    <name>Duplicate</name>
                                            <outwardlinks description="duplicates">
                                        <issuelink>
            <issuekey id="14181">PIPE2D-507</issuekey>
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                            <issuelinktype id="10003">
                    <name>Relates</name>
                                                                <inwardlinks description="relates to">
                                        <issuelink>
            <issuekey id="13431">PIPE2D-391</issuekey>
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