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        <build-date>13-09-2019</build-date>
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<item>
            <title>[PIPE2D-381] Leave lamp response in the master flat</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-381</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;Spectra extracted from the image must have been divided through by the response of the system to the flat-field lamp; that is, we should not make any correction for the effects of the flat-field lamp or the dichroic in the per-arm spectra, and we should not correct the merged spectra for the flat-field lamp spectrum until we look at the spectrophotometric standards (at that point in open-use when no spectrophotometric standards have been observed we may want to do something special/hacky).&lt;/p&gt;

&lt;p&gt;Currently, this is done by normalising the flat-fields row by row, and putting the lamp response in the fiberTrace. However, we want to reverse this: the flat should not be normalised row by row, and the fiberTrace should be normalised row by row. That flat should be normalised as a whole across the entire instrument, as is done for imaging.&lt;/p&gt;</description>
                <environment></environment>
        <key id="13394">PIPE2D-381</key>
            <summary>Leave lamp response in the master flat</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10100" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="No further work should be done on this.">Won&apos;t Fix</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="2">Won&apos;t Fix</resolution>
                                        <assignee username="price">price</assignee>
                                    <reporter username="price">price</reporter>
                        <labels>
                    </labels>
                <created>Tue, 5 Mar 2019 20:59:24 +0000</created>
                <updated>Mon, 23 Aug 2021 20:30:21 +0000</updated>
                            <resolved>Mon, 23 Aug 2021 20:30:21 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>2</watches>
                                                                <comments>
                            <comment id="15115" author="price" created="Wed, 13 Mar 2019 19:04:31 +0000"  >&lt;p&gt;I&apos;m not sure it&apos;s possible to leave the lamp response in the master flat, because neighbouring fibers may have different response, so it&apos;s not clear what the value between them should be.&lt;/p&gt;</comment>
                            <comment id="15221" author="price" created="Mon, 1 Apr 2019 07:24:13 +0000"  >&lt;p&gt;I believe &lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=rhl&quot; class=&quot;user-hover&quot; rel=&quot;rhl&quot;&gt;rhl&lt;/a&gt;&apos;s plan is to construct a separate flat image for each fiber. This will require defining a new flat-field class, which is more work than we were initially considering. &lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=hassan&quot; class=&quot;user-hover&quot; rel=&quot;hassan&quot;&gt;hassan&lt;/a&gt;, is this something you want to do now?&lt;/p&gt;</comment>
                            <comment id="15223" author="hassan" created="Mon, 1 Apr 2019 15:29:43 +0000"  >&lt;p&gt;This can be re-scheduled for a later sprint as it&apos;s not critical on anything, although it&apos;s good to clean up earlier. I&apos;ll move it to the next sprint.&lt;/p&gt;

&lt;p&gt;Can you elaborate a little more on what is needed? You need to define a whole new class for flats?&lt;/p&gt;</comment>
                            <comment id="15224" author="hassan" created="Mon, 1 Apr 2019 16:10:34 +0000"  >&lt;p&gt;Actually just talked to @rhl about it, and this particular ticket can be addressed, but without needing - at this stage - to create flat images for each fiber. The work of creating individual fiber images can be done later this year. &lt;/p&gt;

&lt;p&gt;So this particular ticket will remain in this sprint.&lt;/p&gt;</comment>
                            <comment id="21751" author="price" created="Wed, 28 Jul 2021 14:45:09 +0000"  >&lt;p&gt;&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=rhl&quot; class=&quot;user-hover&quot; rel=&quot;rhl&quot;&gt;rhl&lt;/a&gt; is this still something you want to do? Putting the lamp response in the flat would undo the recent work to have &lt;tt&gt;pfsArm&lt;/tt&gt; fluxes in counts.&lt;/p&gt;</comment>
                            <comment id="21812" author="hassan" created="Thu, 12 Aug 2021 15:16:01 +0000"  >&lt;p&gt;&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=rhl&quot; class=&quot;user-hover&quot; rel=&quot;rhl&quot;&gt;rhl&lt;/a&gt; will look into this and comment shortly. This could be closed as won&apos;t fix and revisit later.&lt;/p&gt;</comment>
                            <comment id="21850" author="price" created="Mon, 23 Aug 2021 20:30:21 +0000"  >&lt;p&gt;In our meeting today, we agreed that the current way we&apos;re flat-fielding and normalising is how we want to proceed, at least in the medium-term.&lt;/p&gt;</comment>
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