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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[PIPE2D-364] Extrapolate the AMBRE library to 1260 nm</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-364</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;The AMBRE library provides high-resolution stella spectra over the range of 300-1200 nm. Extend this to the upper end of the PFS NIR coverage of 1260 nm&lt;/p&gt;</description>
                <environment></environment>
        <key id="13358">PIPE2D-364</key>
            <summary>Extrapolate the AMBRE library to 1260 nm</summary>
                <type id="3" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10518&amp;avatarType=issuetype">Task</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="takuji.yamashita">Takuji Yamashita</assignee>
                                    <reporter username="hassan">hassan</reporter>
                        <labels>
                            <label>flux-calibration</label>
                            <label>model-templates</label>
                    </labels>
                <created>Tue, 19 Feb 2019 16:44:11 +0000</created>
                <updated>Mon, 22 Apr 2019 08:13:45 +0000</updated>
                            <resolved>Fri, 5 Apr 2019 14:58:34 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>4</watches>
                                                                <comments>
                            <comment id="15044" author="rhl" created="Tue, 5 Mar 2019 15:12:43 +0000"  >&lt;p&gt;I believe that we hoped to get the stellar atmosphere modellers to extend the wavelength coverage. Is that still the plan behind this ticket?&lt;/p&gt;

&lt;p&gt;&#160;&lt;/p&gt;</comment>
                            <comment id="15058" author="msyktnk" created="Thu, 7 Mar 2019 06:59:06 +0000"  >&lt;p&gt;The short-term solution is to fit the continuum at &amp;lt;1.2um&#160; and extrapolate it out to 1.26um, and that is the plan of this ticket.&#160; I am still thinking about asking the modeller to extend the model.&#160; He asked me for a line list.&#160; I iterated a bit with the GA team and I realized that there are few strong lines between 1.20 and 1.26um.&#160; So, we may just ask him to extend without a line list.&#160; We can mask any obvious lines between 1.20 and 1.26 in observed spectra, so that they do not affect flux calibration vectors.&lt;/p&gt;</comment>
                            <comment id="15282" author="takuji.yamashita" created="Fri, 5 Apr 2019 02:36:19 +0000"  >&lt;p&gt;This figure is an example of the extrapolation.&#160;&lt;/p&gt;

&lt;p&gt;&lt;img src=&quot;https://pfspipe.ipmu.jp/jira/images/icons/attach/noimage.png&quot; imagetext=&quot;p7000_g 4.0_m0.0_t01_z 0.50_a 0.00.AMBRE_Extp.png|thumbnail&quot; align=&quot;absmiddle&quot; border=&quot;0&quot; /&gt;&lt;/p&gt;

&lt;p&gt;(p7000_g+4.0_m0.0_t01_z+0.50_a+0.00.AMBRE_Extp.png)&lt;br/&gt;
&lt;span class=&quot;nobr&quot;&gt;&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/attachment/11909/11909_p7000_g%2B4.0_m0.0_t01_z%2B0.50_a%2B0.00.AMBRE_Extp.png&quot; title=&quot;p7000_g+4.0_m0.0_t01_z+0.50_a+0.00.AMBRE_Extp.png attached to PIPE2D-364&quot;&gt;p7000_g+4.0_m0.0_t01_z+0.50_a+0.00.AMBRE_Extp.png&lt;sup&gt;&lt;img class=&quot;rendericon&quot; src=&quot;https://pfspipe.ipmu.jp/jira/images/icons/link_attachment_7.gif&quot; height=&quot;7&quot; width=&quot;7&quot; align=&quot;absmiddle&quot; alt=&quot;&quot; border=&quot;0&quot;/&gt;&lt;/sup&gt;&lt;/a&gt;&lt;/span&gt;&lt;br/&gt;
The extrapolated spectrum from 12000 A to 13000 A was generated from the best fit exponential function. The fitting was done in 9800-11800 A. Before fitting, the spectrum was smoothed by a Gaussian kernel with 2.4 A FWHM (the PFS resolution in NIR), and the Paschen absorptions were masked.&#160;&lt;/p&gt;

&lt;p&gt;The generated spectrum (the smoothed spectrum + extrapolation) is saved in a csv file.&#160;&lt;/p&gt;

&lt;p&gt;&#160;&lt;/p&gt;</comment>
                            <comment id="15287" author="hassan" created="Fri, 5 Apr 2019 12:54:53 +0000"  >&lt;p&gt;&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=takuji.yamashita&quot; class=&quot;user-hover&quot; rel=&quot;takuji.yamashita&quot;&gt;Takuji Yamashita&lt;/a&gt; &lt;a href=&quot;https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=msyktnk&quot; class=&quot;user-hover&quot; rel=&quot;msyktnk&quot;&gt;Masayuki Tanaka&lt;/a&gt; are you waiting now for feedback from others? If so, set the status of this ticket to &apos;In Review&apos; and assign a reviewer (eg rhl).&lt;/p&gt;</comment>
                            <comment id="15288" author="hassan" created="Fri, 5 Apr 2019 14:58:34 +0000"  >&lt;p&gt;Following the DRP telecon 2019-04-05, it was agreed to close this ticket based on the work done.&lt;/p&gt;</comment>
                            <comment id="15342" author="takuji.yamashita" created="Mon, 22 Apr 2019 08:12:04 +0000"  >&lt;p&gt;This ticket has been closed but I make a note of some revisions to reduce a file size.&lt;br/&gt;
 The AMBRE stellar models were processed with extrapolateAMBRE.py in a branch &#8220;tickets/ /&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-364&quot; title=&quot;Extrapolate the AMBRE library to 1260 nm&quot; class=&quot;issue-link&quot; data-issue-key=&quot;PIPE2D-364&quot;&gt;&lt;del&gt;PIPE2D-364&lt;/del&gt;&lt;/a&gt;&#8221; of the git repository &#8220;drp_fstar&#8221;. A processed spectrum contains flux density from ~300 nm to 1300 nm at a step of 0.01 nm. FITS headers contain CRPIX1, CRVAL, CDELT for the wavelength solution, parameters of continuum fitting, and parameters of the original model. A size of a file is 0.4MB. In total, the size is ~2GB for models of Teff = 6000-8000 K.&lt;br/&gt;
 &#160;&lt;br/&gt;
 The procedure of the code is as follows. The asterisk denotes the revisions.&lt;br/&gt;
 1*. binning a spectrum from 0.001 nm/pix to 0.01 nm/pix.&lt;br/&gt;
 2. smoothing the spectrum with Gaussian kernel with a FWHM of 0.24 nm (= the resolution in NIR of PFS).&lt;br/&gt;
 3. mask Paschen absorptions. FWHM to be mask is set to be 30 nm.&lt;br/&gt;
 4. fitting the spectrum (wavelength vs. F_lambda) at 980-1180 nm using an exponential function .&lt;br/&gt;
 5. extrapolation between ~ 1200 nm and 1300 nm using the fitting result.&lt;br/&gt;
 6*. save the processed spectrum (binned spectrum + extrapolation) in .fits with headers. The units is nm and nJy.&lt;br/&gt;
 &#160;&lt;br/&gt;
 The step 2 will be revised after the line spread function is provided.&lt;/p&gt;</comment>
                    </comments>
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                                        <issuelink>
            <issuekey id="13359">PIPE2D-365</issuekey>
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            <issuekey id="13413">SIM2D-113</issuekey>
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            <issuekey id="13029">PIPE2D-304</issuekey>
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                            <attachment id="11909" name="p7000_g+4.0_m0.0_t01_z+0.50_a+0.00.AMBRE_Extp.png" size="157769" author="takuji.yamashita" created="Fri, 5 Apr 2019 02:21:02 +0000"/>
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