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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[PIPE2D-298] Record throughput in FiberTrace</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-298</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-290&quot; title=&quot;Fix normalisation of fibers in flats&quot; class=&quot;issue-link&quot; data-issue-key=&quot;PIPE2D-290&quot;&gt;&lt;del&gt;PIPE2D-290&lt;/del&gt;&lt;/a&gt; (&quot;Fix normalisation of fibers in flats&quot;) corrected the fibers so they are all calibrated to the same spectrum. However, we want to apply this kind of calibration on a more frequent timescale than on which we make the flat-fields. We can measure it when we construct the &lt;tt&gt;FiberTrace&lt;/tt&gt;, store it in the &lt;tt&gt;FiberTrace&lt;/tt&gt;, and apply it when we extract.&lt;/p&gt;</description>
                <environment></environment>
        <key id="13009">PIPE2D-298</key>
            <summary>Record throughput in FiberTrace</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="price">price</assignee>
                                    <reporter username="price">price</reporter>
                        <labels>
                    </labels>
                <created>Thu, 18 Oct 2018 15:40:41 +0000</created>
                <updated>Mon, 5 Nov 2018 19:32:15 +0000</updated>
                            <resolved>Mon, 5 Nov 2018 19:32:15 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>1</watches>
                                                                <comments>
                            <comment id="14270" author="price" created="Wed, 24 Oct 2018 19:52:50 +0000"  >&lt;p&gt;This also involved some refactoring and the addition of a front-end to the plotting stuff I introduced earlier.&lt;/p&gt;

&lt;div class=&quot;code panel&quot; style=&quot;border-width: 1px;&quot;&gt;&lt;div class=&quot;codeContent panelContent&quot;&gt;
&lt;pre class=&quot;code-java&quot;&gt;
price@Pauls-MacBook-Pro:~/pfs/drp_stella (tickets/PIPE2D-298=) $ git sub
commit 4c46191aea4a8101caeac058a7c2c39a22199274
Author: Paul Price &amp;lt;price@astro.princeton.edu&amp;gt;
Date:   Thu Oct 18 15:46:22 2018 -0400

    refactor calib construction using base class
    
    The ConstructFiberFlatTask and ConstructFiberTraceTask are similar,
    but different. The relation has been expressed as the first inheriting
    from the second, but it&lt;span class=&quot;code-quote&quot;&gt;&apos;s not really an &apos;&lt;/span&gt;is a&apos; relationship. Instead,
    have them share a base &lt;span class=&quot;code-keyword&quot;&gt;class &lt;/span&gt;that does the common operations.

 python/pfs/drp/stella/constructFiberFlatTask.py  |  91 ++-----------
 python/pfs/drp/stella/constructFiberTraceTask.py | 163 ++++------------------
 python/pfs/drp/stella/constructSpectralCalibs.py | 165 +++++++++++++++++++++++
 3 files changed, 199 insertions(+), 220 deletions(-)

commit c5fa627391fbee9266137c7b572054820d2a4020
Author: Paul Price &amp;lt;price@astro.princeton.edu&amp;gt;
Date:   Tue Oct 23 17:23:16 2018 -0400

    Add plotArm.py to plot spectra from a PfsArm

 bin.src/plotArm.py | 44 ++++++++++++++++++++++++++++++++++++++++++++
 1 file changed, 44 insertions(+)

commit d151e21c16cb31b93e3b78a50a83246e61c998c8
Author: Paul Price &amp;lt;price@astro.princeton.edu&amp;gt;
Date:   Tue Oct 23 17:48:00 2018 -0400

    constructFiberFlat: pull averaging of spectra into base class
    
    We will use it in constructFiberTrace as well.

 python/pfs/drp/stella/constructFiberFlatTask.py  | 16 +----------
 python/pfs/drp/stella/constructSpectralCalibs.py | 34 ++++++++++++++++++++++++
 2 files changed, 35 insertions(+), 15 deletions(-)

commit 9d3442d708c9831ac37d88cbbdc5a4fe8f6663a1 (HEAD -&amp;gt; tickets/PIPE2D-298, origin/tickets/PIPE2D-298)
Author: Paul Price &amp;lt;price@astro.princeton.edu&amp;gt;
Date:   Tue Oct 23 17:50:01 2018 -0400

    constructFiberTrace: scale trace to match spectra
    
    If the throughput of the fibers varies, we want the trace to track that.
    This is already corrected in the flat-field, but we expect that it may
    change on shorter durations than the imaging flat.

 python/pfs/drp/stella/constructFiberTraceTask.py | 14 ++++++++++++++
 1 file changed, 14 insertions(+)
&lt;/pre&gt;
&lt;/div&gt;&lt;/div&gt;</comment>
                            <comment id="14348" author="price" created="Mon, 5 Nov 2018 19:32:15 +0000"  >&lt;p&gt;Merged to master after changes approved on GitHub.&lt;/p&gt;</comment>
                    </comments>
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            <issuekey id="12828">PIPE2D-290</issuekey>
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