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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
    <language>en-us</language>    <build-info>
        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
    </build-info>


<item>
            <title>[PIPE2D-1220] Create fiberProfiles from 2023 Apr/May engineering data</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/PIPE2D-1220</link>
                <project id="10002" key="PIPE2D">DRP 2-D Pipeline</project>
                    <description>&lt;p&gt;During the 2023 Apr/May engineering run, we &lt;a href=&quot;https://sumire.pbworks.com/w/page/152988447/Calibration%20Data%20from%20Run%2011&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;obtained data&lt;/a&gt; from which to generate fiber profiles for b/r 1/3. Some limited data was also acquired for m 1/3. Build fiber profiles and install in a new calib repository (&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-1216&quot; title=&quot;Create calibs in support of 2023 Apr/May engineering run&quot; class=&quot;issue-link&quot; data-issue-key=&quot;PIPE2D-1216&quot;&gt;&lt;del&gt;PIPE2D-1216&lt;/del&gt;&lt;/a&gt;).&lt;/p&gt;</description>
                <environment>&lt;p&gt;C&lt;/p&gt;</environment>
        <key id="23436">PIPE2D-1220</key>
            <summary>Create fiberProfiles from 2023 Apr/May engineering data</summary>
                <type id="10001" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10515&amp;avatarType=issuetype">Story</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="price">price</assignee>
                                    <reporter username="price">price</reporter>
                        <labels>
                    </labels>
                <created>Fri, 12 May 2023 17:50:13 +0000</created>
                <updated>Fri, 26 May 2023 15:41:04 +0000</updated>
                            <resolved>Fri, 26 May 2023 15:41:04 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>1</watches>
                                                                <comments>
                            <comment id="32697" author="price" created="Tue, 16 May 2023 17:39:15 +0000"  >&lt;p&gt;From my notes:&lt;/p&gt;
&lt;blockquote&gt;
&lt;p&gt;May as well rebuild the fiber profiles we built during the run, with the latest code (e.g., crosstalk corrections). Using branch tickets/&lt;a href=&quot;https://pfspipe.ipmu.jp/jira/browse/PIPE2D-1209&quot; title=&quot;Optimize reduceProfiles&quot; class=&quot;issue-link&quot; data-issue-key=&quot;PIPE2D-1209&quot;&gt;&lt;del&gt;PIPE2D-1209&lt;/del&gt;&lt;/a&gt; (reduceProfile optimisations).&lt;/p&gt;

&lt;div class=&quot;code panel&quot; style=&quot;border-width: 1px;&quot;&gt;&lt;div class=&quot;codeContent panelContent&quot;&gt;
&lt;pre class=&quot;code-java&quot;&gt;
reduceProfiles.py /work/drp --calib=/work/price/CALIB-202304-eng --rerun=price/pipe2d-1220 --id visit=92413..92417^92419..92425^92317..92323^92251..92257^91942..91946^92272..92278^92330..92336 --normId visit=91907..91909 -j 4 -c profiles.profileRadius=10 profiles.profileOversample=3 profiles.profileSwath=2000 profiles.profileRejThresh=5 reduceExposure.isr.doFlat=False
&lt;/pre&gt;
&lt;/div&gt;&lt;/div&gt;

&lt;p&gt;Looks good, like before.&lt;/p&gt;

&lt;div class=&quot;code panel&quot; style=&quot;border-width: 1px;&quot;&gt;&lt;div class=&quot;codeContent panelContent&quot;&gt;
&lt;pre class=&quot;code-java&quot;&gt;
sqlite&amp;gt; DELETE FROM fiberProfiles WHERE arm in (&lt;span class=&quot;code-quote&quot;&gt;&quot;b&quot;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&quot;r&quot;&lt;/span&gt;);
sqlite&amp;gt; DELETE FROM fiberProfiles_visit WHERE arm in (&lt;span class=&quot;code-quote&quot;&gt;&quot;b&quot;&lt;/span&gt;, &lt;span class=&quot;code-quote&quot;&gt;&quot;r&quot;&lt;/span&gt;);
(lsst-scipipe-3.0.0) price@pfsa-usr02-gb:/work/price/CALIB-202304-eng $ rm FIBERPROFILES/*[br]?.fits
(lsst-scipipe-3.0.0) price@pfsa-usr02-gb:/work/price/CALIB-202304-eng $ ingestPfsCalibs.py /work/drp --calib /work/drp/CALIB /work/drp/rerun/price/pipe2d-1220/FIBERPROFILES/pfsFiberProfiles-2023-04-26-091942-*.fits --validity 10000 -c clobber=True --mode=copy
&lt;/pre&gt;
&lt;/div&gt;&lt;/div&gt;

&lt;p&gt;For m, we don&apos;t have a full dataset: just one set of mod4 and one set with all fibers hidden. I&apos;m going to try it, with a reduced profile radius, but I don&apos;t have high hopes of it being particularly successful.&lt;/p&gt;

&lt;div class=&quot;code panel&quot; style=&quot;border-width: 1px;&quot;&gt;&lt;div class=&quot;codeContent panelContent&quot;&gt;
&lt;pre class=&quot;code-java&quot;&gt;
reduceProfiles.py /work/drp --calib=/work/price/CALIB-202304-eng --rerun=price/pipe2d-1220 --id visit=92237..92241^92258..92262 arm=m --normId visit=91427..91436 arm=m -j 2 -c profiles.profileRadius=4 profiles.profileOversample=3 profiles.profileSwath=2000 profiles.profileRejThresh=5 reduceExposure.isr.doFlat=False --no-versions
&lt;/pre&gt;
&lt;/div&gt;&lt;/div&gt;

&lt;p&gt;Hmm. reduceProfiles doesn&apos;t work if there isn&apos;t an existing fiberProfiles in the calib registry, because it uses the fiberProfiles as part of reducing the individual exposures (e.g., centroiding on arc lines).&lt;br/&gt;
And the exposures being used for normalisation used the ring lamp, so they&apos;re coming up as sky exposures, not quartzes.&lt;br/&gt;
And for some reason, the m1 fiberProfiles is getting written with a date from 2022, not 2023.&lt;/p&gt;

&lt;p&gt;Fixed all that.&lt;br/&gt;
But the m profiles are pretty rubbish. Not going any further with them.&lt;/p&gt;&lt;/blockquote&gt;</comment>
                            <comment id="32756" author="price" created="Fri, 26 May 2023 15:41:04 +0000"  >&lt;p&gt;These calibs were installed in &lt;tt&gt;CALIB-2023-04-v1&lt;/tt&gt;.&lt;/p&gt;</comment>
                    </comments>
                    <attachments>
                            <attachment id="15631" name="pipe2d-1216.ipynb" size="9221" author="price" created="Tue, 16 May 2023 17:45:36 +0000"/>
                            <attachment id="15630" name="profiles-b1.pdf" size="936154" author="price" created="Tue, 16 May 2023 17:42:48 +0000"/>
                            <attachment id="15629" name="profiles-b3.pdf" size="928557" author="price" created="Tue, 16 May 2023 17:42:45 +0000"/>
                            <attachment id="15628" name="profiles-m1.pdf" size="442047" author="price" created="Tue, 16 May 2023 17:42:45 +0000"/>
                            <attachment id="15627" name="profiles-m3.pdf" size="434293" author="price" created="Tue, 16 May 2023 17:42:44 +0000"/>
                            <attachment id="15626" name="profiles-r1.pdf" size="924272" author="price" created="Tue, 16 May 2023 17:42:45 +0000"/>
                            <attachment id="15625" name="profiles-r3.pdf" size="975313" author="price" created="Tue, 16 May 2023 17:42:44 +0000"/>
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