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    <title>PFS-JIRA</title>
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        <version>8.3.4</version>
        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[INSTRM-561] MCS image frame occasionally shifts in x axis</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/INSTRM-561</link>
                <project id="10300" key="INSTRM">Instrument control development</project>
                    <description>&lt;p&gt;While a series of 50 frames were taken in the MCS engineering run, pin-hole mask spot on MCS image occasionally looked to shift by ~50 pixels in X-axis and went back to the previous position .&lt;br/&gt;
Example: visit 6878&lt;br/&gt;
&lt;a href=&quot;https://sumire.pbworks.com/w/file/129778914/SpotShift_visit6768b.png&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;https://sumire.pbworks.com/w/file/129778914/SpotShift_visit6768b.png&lt;/a&gt;&lt;br/&gt;
The image in problem has bad pixels at the left-bottom corner (see the following link), which may make read-out incorrectly.&lt;br/&gt;
&lt;a href=&quot;https://sumire.pbworks.com/w/file/129778911/SpotShift_visit6768.png&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;https://sumire.pbworks.com/w/file/129778911/SpotShift_visit6768.png&lt;/a&gt;&lt;/p&gt;</description>
                <environment></environment>
        <key id="13052">INSTRM-561</key>
            <summary>MCS image frame occasionally shifts in x axis</summary>
                <type id="3" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10518&amp;avatarType=issuetype">Task</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="chyan">chyan</assignee>
                                    <reporter username="yuki.moritani">yuki.moritani</reporter>
                        <labels>
                    </labels>
                <created>Fri, 26 Oct 2018 14:08:17 +0000</created>
                <updated>Tue, 13 Aug 2019 12:41:34 +0000</updated>
                            <resolved>Tue, 13 Aug 2019 12:41:34 +0000</resolved>
                                                                    <component>ics_mcsActor</component>
                        <due></due>
                            <votes>0</votes>
                                    <watches>3</watches>
                                                                <comments>
                            <comment id="14278" author="cloomis" created="Fri, 26 Oct 2018 15:01:56 +0000"  >&lt;p&gt;The &quot;inserted&quot; pixels looked diagnostic. Looking for high noise in the first 100 pixels coughed up four in ~7000 frames:&lt;/p&gt;
&lt;ul class=&quot;alternate&quot; type=&quot;square&quot;&gt;
	&lt;li&gt;1123 on 10/24 &amp;#8211; has double spots: some reads in stack are ok.&lt;/li&gt;
	&lt;li&gt;2476 on 10/24 &amp;#8211; double spots&lt;/li&gt;
	&lt;li&gt;5704 on 10/25&lt;/li&gt;
	&lt;li&gt;6768 on 10/26&lt;/li&gt;
&lt;/ul&gt;


&lt;p&gt;The bottom corners are shown in &lt;a href=&quot;https://sumire.pbworks.com/w/file/129779655/INSTRM-561_glitches.png&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;https://sumire.pbworks.com/w/file/129779655/INSTRM-561_glitches.png&lt;/a&gt;&lt;/p&gt;</comment>
                            <comment id="14712" author="cloomis" created="Thu, 13 Dec 2018 07:38:31 +0000"  >&lt;p&gt;With good centroiding, can simply count peaks.&lt;/p&gt;</comment>
                            <comment id="15942" author="chyan" created="Tue, 13 Aug 2019 12:40:57 +0000"  >&lt;p&gt;This issue can be solved by add a sanity check.  Simply calculating standard deviation of first 100 pixels and then compare with the standard deviation of whole image.  See following link.&lt;/p&gt;

&lt;p&gt;&lt;a href=&quot;https://github.com/Subaru-PFS/ics_mcsActor/commit/3fa3c325a35c13d4b050ca3369cff5e2dee8455f&quot; class=&quot;external-link&quot; rel=&quot;nofollow&quot;&gt;https://github.com/Subaru-PFS/ics_mcsActor/commit/3fa3c325a35c13d4b050ca3369cff5e2dee8455f&lt;/a&gt; &lt;/p&gt;</comment>
                            <comment id="15943" author="chyan" created="Tue, 13 Aug 2019 12:41:34 +0000"  >&lt;p&gt;Waiting to be tested in the coming e-run&lt;/p&gt;</comment>
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