https://pfspipe.ipmu.jp/jira This file is an XML representation of an issue en-us 8.3.4 803005 13-09-2019 https://pfspipe.ipmu.jp/jira/browse/INSTRM-523 Instrument control development <p>Please provide visualization code for MCS Engineering run in Oct 2018 </p> INSTRM-523

Provide visualization code for MCS Engineering run

Task Normal Done Done karr hassan MCS Thu, 11 Oct 2018 21:17:05 +0000 Thu, 8 Nov 2018 22:20:13 +0000 Thu, 8 Nov 2018 22:20:13 +0000 ics_mcsActor 0 1 <p>Current development is available on master:</p> <p><a href="https://github.com/Subaru-PFS/ics_mcsActor/tree/master/python/mcsActor/Visualization" class="external-link" rel="nofollow">https://github.com/Subaru-PFS/ics_mcsActor/tree/master/python/mcsActor/Visualization</a></p> <p><a href="https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=chyan" class="user-hover" rel="chyan">chyan</a> and <a href="https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=karr" class="user-hover" rel="karr">karr</a> will do tests over the next few days to demonstrate the current code.</p> <p>Below are notes from <a href="https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=karr" class="user-hover" rel="karr">karr</a> (email <span class="error">&#91;PFS-ics:01522&#93;</span> sent 2018-10-11) providing the most recent status:</p> <blockquote> <p>Visualization notebook tested on Subaru system (running remotely)</p> <ul class="alternate" type="square"> <li>displaying notebook, importing and running the code, reading<br/> sets of centroids from the database, running them through the code.</li> </ul> <ul class="alternate" type="square"> <li>added more intelligent setting of parameters for centroiding, particularly<br/> the threshold value for finding spots. The MHS command setCentroidParameters<br/> will read values from keywords in the command, otherwise will attempt to calculate a<br/> reasonable threshold (based on what works with lab data), and if there is no image in memory<br/> will set a value that will at least run.</li> </ul> <ul class="alternate" type="square"> <li>most recent version has been pushed to ics_mcsActor master branch</li> </ul> <p>Things left to test (as was in my email exchanges with Chi-Hung and Craig).</p> <ul class="alternate" type="square"> <li>reading the image from the database (getting the correct filename from the frameID and reading the image from the remote disk).</li> </ul> <ul class="alternate" type="square"> <li>fix ginga plugin in notebook so it displays remotely (interactive viewing of the image during the run is important). This is probably an issue of setting the hostname/ports correctly.</li> </ul> <ul class="alternate" type="square"> <li>I have a few updates to finish on my end, which include a more manual option for registering the spots to the mask (in case of odd data or unexpected behaviour in the code).</li> </ul> <ul class="alternate" type="square"> <li>check the notebooks running on shell-ics (we were testing on mcs computer earlier because shell-ics was down)</li> </ul> </blockquote> <p><a href="https://pfspipe.ipmu.jp/jira/secure/ViewProfile.jspa?name=karr" class="user-hover" rel="karr">karr</a>: I presume this ticket is done. Can we close this now?</p> <p>As far as the engineering run Oct 2018, this issue is resolved. Further work in the visualization code should be raised as separate tickets.</p> Development Rank 0|ii015w:wi