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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
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        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[INSTRM-338] Improve performance on PFS machines at Subaru</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/INSTRM-338</link>
                <project id="10300" key="INSTRM">Instrument control development</project>
                    <description>&lt;p&gt;The VMs seem to be very slow, probably from IO.&lt;br/&gt;
 I&apos;ll compare installing conda on shell-ics to an NFS-mounted /software, to installing on a physical oldish machine with not special spinning disks. I&apos;d expect the NFS to maybe cause some slowdown, but I though there was a fast cache for that on the server? But it is much worse than that &#8211; bad enough to be a problem.&lt;/p&gt;

&lt;p&gt;&lt;tt&gt;bash Miniconda3-latest-Linux-x86_64.sh -b -p /software/conda&lt;/tt&gt;: 2m22 vs. 13s&lt;br/&gt;
 &lt;tt&gt;conda update -y conda&lt;/tt&gt;: 1m5s vs. 16s&lt;br/&gt;
 &lt;tt&gt;conda install numpy cython twisted ply future astropy ruamel_yaml ipython&lt;/tt&gt;: 6m48s vs. 2m42s&lt;/p&gt;</description>
                <environment></environment>
        <key id="12309">INSTRM-338</key>
            <summary>Improve performance on PFS machines at Subaru</summary>
                <type id="3" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10518&amp;avatarType=issuetype">Task</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="1" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/open.png" description="The issue is open and ready for the assignee to start work on it.">Open</status>
                    <statusCategory id="2" key="new" colorName="blue-gray"/>
                                    <resolution id="-1">Unresolved</resolution>
                                        <assignee username="-1">Unassigned</assignee>
                                    <reporter username="cloomis">cloomis</reporter>
                        <labels>
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                <created>Wed, 25 Apr 2018 19:53:28 +0000</created>
                <updated>Thu, 10 May 2018 08:25:48 +0000</updated>
                            <resolved>Wed, 25 Apr 2018 19:53:28 +0000</resolved>
                                                                    <component>ics_production</component>
                        <due></due>
                            <votes>0</votes>
                                    <watches>3</watches>
                                                                <comments>
                            <comment id="13314" author="atsushi.shimono" created="Mon, 30 Apr 2018 14:07:46 +0000"  >&lt;p&gt;it is known/reported/discussed issue which I have not succeeded to resolve more than two/three years, that jfs+nfs has significant (~2 times) performance issue on appending to files more than 1-2TB, and xfs+jfs has significant (~1 digit / ~10 times) performance issue on any stat action to dir/file. so, for now PFS servers at IPMU uses jfs for its NFS server, but following Princeton order I configured the summit as xfs for NFS storage.&lt;br/&gt;
so, help wanted, or wontfix.&lt;/p&gt;</comment>
                            <comment id="13316" author="cloomis" created="Mon, 30 Apr 2018 15:39:11 +0000"  >&lt;p&gt;The disk controller has a battery-backed RAM cache, right? Are the xfs barriers turned off (along with disk caches)?&lt;/p&gt;</comment>
                            <comment id="13327" author="atsushi.shimono" created="Tue, 1 May 2018 12:54:09 +0000"  >&lt;p&gt;its due to a combination of xfs and NFS, so it does not depends on its storage device. ~1 digit performance degradation was measured between physical and NFS, as previously reported.&lt;/p&gt;</comment>
                            <comment id="13339" author="cloomis" created="Tue, 1 May 2018 13:46:31 +0000"  >&lt;p&gt;But XFS barriers do matter, especially on NFS servers &#8211; if you can legitimately turn them off because you have battery-backed cache in the right place, you gain &lt;em&gt;enormously&lt;/em&gt;.&lt;/p&gt;</comment>
                            <comment id="13389" author="atsushi.shimono" created="Thu, 10 May 2018 08:25:48 +0000"  >&lt;p&gt;if it is an issue on bulk (or even sequential) read/write performance, such async or caching could work well, but the issue is handling of stat. &lt;br/&gt;
async option could help a bit for stat performance, but it is after NFS server-client communication (like server reply immediately after commit with no-op) and in filesystem + block device, so it would not have any significant change for our issue.&lt;/p&gt;
&lt;ol&gt;
	&lt;li&gt;actually, testing with noatime (client), async (server) does not change stat performance.&lt;/li&gt;
&lt;/ol&gt;
</comment>
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