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    <title>PFS-JIRA</title>
    <link>https://pfspipe.ipmu.jp/jira</link>
    <description>This file is an XML representation of an issue</description>
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        <build-number>803005</build-number>
        <build-date>13-09-2019</build-date>
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<item>
            <title>[INSTRM-1775] confirm that mapping from cobra to sm1-3  fibers is correct</title>
                <link>https://pfspipe.ipmu.jp/jira/browse/INSTRM-1775</link>
                <project id="10300" key="INSTRM">Instrument control development</project>
                    <description>&lt;p&gt;Data has been taken in the last september run to check the mapping from cobra to sm1 fibers.&lt;br/&gt;
I already analyzed it at the summit and it looked fine as far as I remember.&lt;br/&gt;
I just need to confirm this result and declare this no longer a problem.&lt;/p&gt;

&lt;p&gt;Data has been taken again (2022-11-17, iic_sequence_id=18555),  with sm1 and sm3, I&apos;ll post the results here.&lt;/p&gt;</description>
                <environment></environment>
        <key id="23088">INSTRM-1775</key>
            <summary>confirm that mapping from cobra to sm1-3  fibers is correct</summary>
                <type id="3" iconUrl="https://pfspipe.ipmu.jp/jira/secure/viewavatar?size=xsmall&amp;avatarId=10518&amp;avatarType=issuetype">Task</type>
                                            <priority id="10000" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/priorities/medium.svg">Normal</priority>
                        <status id="10002" iconUrl="https://pfspipe.ipmu.jp/jira/images/icons/statuses/generic.png" description="The issue is resolved, reviewed, and merged">Done</status>
                    <statusCategory id="3" key="done" colorName="green"/>
                                    <resolution id="10000">Done</resolution>
                                        <assignee username="arnaud.lefur">arnaud.lefur</assignee>
                                    <reporter username="arnaud.lefur">arnaud.lefur</reporter>
                        <labels>
                    </labels>
                <created>Tue, 1 Nov 2022 14:51:10 +0000</created>
                <updated>Fri, 10 Feb 2023 16:28:00 +0000</updated>
                            <resolved>Fri, 10 Feb 2023 16:28:00 +0000</resolved>
                                                                        <due></due>
                            <votes>0</votes>
                                    <watches>1</watches>
                                                                <comments>
                            <comment id="31819" author="arnaud.lefur" created="Sat, 19 Nov 2022 06:17:33 +0000"  >&lt;p&gt;To give a bit of context with this dataset :&lt;br/&gt;
We move all cobras behind the dot in the first place and then we move the cobra out of the dot, group by group and take an exposure each time.&lt;br/&gt;
So what I did is calculating the flux gradient between visit&lt;span class=&quot;error&quot;&gt;&amp;#91;i+1&amp;#93;&lt;/span&gt; and visit&lt;span class=&quot;error&quot;&gt;&amp;#91;i&amp;#93;&lt;/span&gt; and find the group that was moved matching the maximum gradient, that&apos;s the &quot;mostLikely&quot; column, in a perfect world, actualGroup always match mostLikely.&lt;br/&gt;
the sig1 and sig2 columns gives you a sort of confidence value, with&lt;/p&gt;

&lt;p&gt;sig1 = gradient&lt;span class=&quot;error&quot;&gt;&amp;#91;actualGroup&amp;#93;&lt;/span&gt;/gradient&lt;span class=&quot;error&quot;&gt;&amp;#91;actualGroup-1&amp;#93;&lt;/span&gt;&lt;br/&gt;
sig2 = gradient&lt;span class=&quot;error&quot;&gt;&amp;#91;actualGroup&amp;#93;&lt;/span&gt;/gradient&lt;span class=&quot;error&quot;&gt;&amp;#91;actualGroup+1&amp;#93;&lt;/span&gt;&lt;/p&gt;

&lt;p&gt;if the mapping is correct, their value is above &amp;gt;1, the higher the ratio, the more confident you are.&lt;/p&gt;

&lt;p&gt;Here, i&apos;m showing only the fibers with sigma&amp;lt;10.&lt;br/&gt;
there are few fibers with sigma slighty above 1 and only one mismatch.&lt;br/&gt;
The only mismatch, is basically in the noise, with less that 1% variation.&lt;/p&gt;

&lt;p&gt;I&apos;ve also added the final result from the roaching prior to the fiberIdentification sequence where cobra were not successfully hidden.&lt;br/&gt;
As one would expect, they match perfectly, the low sigma in the fiberIdentification dataset.&lt;/p&gt;

&lt;p&gt;So I think, we can conclude that there are no fiberMapping issue in sm1 or sm3.&lt;/p&gt;
</comment>
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                    <attachments>
                            <attachment id="15439" name="dotRoachPriorToFiberMapping.png" size="167907" author="arnaud.lefur" created="Sat, 19 Nov 2022 05:57:08 +0000"/>
                            <attachment id="15438" name="sm1-sm3-fiberMapping.png" size="145137" author="arnaud.lefur" created="Sat, 19 Nov 2022 05:37:57 +0000"/>
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