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Type:
Story
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Status: Done (View Workflow)
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Priority:
Normal
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Resolution: Done
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Affects Version/s: None
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Fix Version/s: None
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Component/s: None
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Labels:None
fmadec reports:
[pfs@1cfe7a2b3699 ics_drpActor]$ export TARGET=/drp/lam [pfs@1cfe7a2b3699 ics_drpActor]$ export RERUN=pfs [pfs@1cfe7a2b3699 ics_drpActor]$ export batchArgs="--batch-type=none --doraise" [pfs@1cfe7a2b3699 ics_drpActor]$ constructFiberFlat.py $TARGET --calib $TARGET/CALIB --rerun $RERUN/calib --id visit=9627..9692 $batchArgs Traceback (most recent call last): File "/opt/lsst/software/stack/stack/miniconda3-4.3.21-10a4fa6/Linux64/drp_stella/1d712c3c7fd8146b89ce5b803da2e0ac5ef99ad7/bin/constructFiberFlat.py", line 2, in <module> from pfs.drp.stella.constructFiberFlatTask import ConstructFiberFlatTask File "/opt/lsst/software/stack/stack/miniconda3-4.3.21-10a4fa6/Linux64/drp_stella/1d712c3c7fd8146b89ce5b803da2e0ac5ef99ad7/python/pfs/drp/stella/__init__.py", line 3, in <module> from .spectraContinued import * File "/opt/lsst/software/stack/stack/miniconda3-4.3.21-10a4fa6/Linux64/drp_stella/1d712c3c7fd8146b89ce5b803da2e0ac5ef99ad7/python/pfs/drp/stella/spectraContinued.py", line 12, in <module> from pfs.datamodel.pfsArm import PfsArm, PfsConfig File "/opt/lsst/software/stack/stack/miniconda3-4.3.21-10a4fa6/Linux64/datamodel/264fb7b46bfa4c56f9c31e5b128850ba3f4a4776/python/pfs/datamodel/pfsArm.py", line 13, in <module> import matplotlib.pyplot as plt File "/software/conda/lib/python3.6/site-packages/matplotlib/pyplot.py", line 31, in <module> import matplotlib.colorbar File "/software/conda/lib/python3.6/site-packages/matplotlib/colorbar.py", line 36, in <module> import matplotlib.contour as contour File "/software/conda/lib/python3.6/site-packages/matplotlib/contour.py", line 20, in <module> import matplotlib.font_manager as font_manager File "/software/conda/lib/python3.6/site-packages/matplotlib/font_manager.py", line 55, in <module> from matplotlib import afm, cbook, ft2font, rcParams, get_cachedir ImportError: /opt/lsst/software/stack/python/miniconda3-4.3.21/lib/python3.6/lib-dynload/../../libz.so.1: version `ZLIB_1.2.9' not found (required by /software/conda/lib/python3.6/site-packages/matplotlib/../../.././libpng16.so.16)
The failure to import matplotlib is not something I can do anything about (it seems to be from mixing conda\ s), but I can make the import matplotlib optional.